18 Parents
| Identifier | Name | Description |
|---|---|---|
| GO:0006396 | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
| GO:0008152 | metabolic process | The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
| GO:0016070 | RNA metabolic process | The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
| GO:0044237 | cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
| GO:0006139 | nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. |
| GO:0071704 | organic substance metabolic process | The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon. |
| GO:0006807 | nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium. |
| GO:0006725 | cellular aromatic compound metabolic process | The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells. |
| GO:0044238 | primary metabolic process | The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. |
| GO:0009987 | cellular process | Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. |
| GO:0008150 | biological_process | Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end. |
| GO:0044260 | cellular macromolecule metabolic process | The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells. |
| GO:0090304 | nucleic acid metabolic process | Any cellular metabolic process involving nucleic acids. |
| GO:0043170 | macromolecule metabolic process | The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. |
| GO:0046483 | heterocycle metabolic process | The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). |
| GO:0034641 | cellular nitrogen compound metabolic process | The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells. |
| GO:1901360 | organic cyclic compound metabolic process | The chemical reactions and pathways involving organic cyclic compound. |
| GO:0010467 | gene expression | The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. |
59 Protein
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0000690.2 | Quercus robur | 8.1 | egn | (M=1) KOG0354//KOG0701//KOG1817 - DEAD-box like helicase [General function prediction only]. // dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification]. // Ribonuclease [RNA processing and modification]. | EC:3.1.26.3 | validated | |
| Qrob_P0006100.2 | Quercus robur | 29.0 | egn | (M=2) K12869 - crooked neck | validated | ||
| Qrob_P0016640.2 | Quercus robur | 100.0 | egn | (M=1) K01164 - ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] | EC:3.1.26.5 | validated | |
| Qrob_P0018280.2 | Quercus robur | 99.1 | egn | (M=2) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase. | EC:2.1.1.35 | validated | |
| Qrob_P0032120.2 | Quercus robur | 96.0 | egn | (M=3) PTHR22792:SF52 - LA-RELATED PROTEIN 6B (PTHR22792:SF52) | validated | ||
| Qrob_P0033540.2 | Quercus robur | 100.0 | egn | (M=1) 3.5.4.34 - tRNA(Ala)(adenine(37)) deaminase. | EC:3.5.4.34 | validated | |
| Qrob_P0097250.2 | Quercus robur | 96.3 | egn | (M=1) 2.1.1.185 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase. | EC:2.1.1.185 | validated | |
| Qrob_P0102680.2 | Quercus robur | 95.0 | egn | (M=3) 2.7.7.72 - CCA tRNA nucleotidyltransferase. | EC:2.7.7.72 | validated | |
| Qrob_P0120240.2 | Quercus robur | 100.0 | egn | (M=1) K12591 - exosome complex exonuclease RRP6 [EC:3.1.13.-] | validated | ||
| Qrob_P0121240.2 | Quercus robur | 0.0 | egn | (M=2) 2.1.1.34 - tRNA (guanosine(18)-2'-O)-methyltransferase. | EC:2.1.1.34 | validated | |
| Qrob_P0123730.2 | Quercus robur | 91.1 | egn | (M=1) K12825 - splicing factor 3A subunit 1 | validated | ||
| Qrob_P0135740.2 | Quercus robur | 97.1 | egn | (M=58) PF13414 - TPR repeat | validated | ||
| Qrob_P0205220.2 | Quercus robur | 100.0 | egn | (M=1) K11088 - small nuclear ribonucleoprotein D3 | validated | ||
| Qrob_P0215880.2 | Quercus robur | 79.2 | egn | (M=2) K12623 - U6 snRNA-associated Sm-like protein LSm4 | validated | ||
| Qrob_P0247550.2 | Quercus robur | 100.0 | egn | (M=1) KOG0307//KOG0566//KOG1923//KOG1924//KOG1984//KOG1985//KOG4672 - Vesicle coat complex COPII subunit SEC31 [Intracellular trafficking secretion and vesicular transport]. // Inositol-1 4 5-triphosphate 5-phosphatase (synaptojanin) INP51/INP52/INP53 family [Intracellular trafficking secretion and vesicular transport]. // Rac1 GTPase effector FRL [Signal transduction mechanisms Cytoskeleton]. // RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms Cytoskeleton]. // Vesicle coat complex COPII subunit SFB3 [Intracellular trafficking secretion and vesicular transport]. // Vesicle coat complex COPII subunit SEC24/subunit SFB2 [Intracellular trafficking secretion and vesicular transport]. // Uncharacterized conserved low complexity protein [Function unknown]. | validated | ||
| Qrob_P0265400.2 | Quercus robur | 5.1 | egn | (M=2) K14792 - rRNA biogenesis protein RRP5 | validated | ||
| Qrob_P0268190.2 | Quercus robur | 99.1 | egn | (M=2) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase. | EC:2.1.1.35 | validated | |
| Qrob_P0288400.2 | Quercus robur | 100.0 | egn | (M=1) PF00035//PF14709 - Double-stranded RNA binding motif // double strand RNA binding domain from DEAD END PROTEIN 1 | validated | ||
| Qrob_P0288410.2 | Quercus robur | 0.0 | egn | (M=1) KOG0330//KOG0331//KOG0333//KOG0338//KOG0340//KOG0343//KOG0350//KOG0354//KOG0701//KOG1817 - ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // U5 snRNP-like RNA helicase subunit [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // RNA Helicase [RNA processing and modification]. // DEAD-box ATP-dependent RNA helicase [RNA processing and modification]. // DEAD-box like helicase [General function prediction only]. // dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification]. // Ribonuclease [RNA processing and modification]. | EC:3.1.26.3 | validated | |
| Qrob_P0288430.2 | Quercus robur | 3.1 | egn | (M=2) KOG0701//KOG1817 - dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification]. // Ribonuclease [RNA processing and modification]. | EC:3.1.26.3 | validated | |
| Qrob_P0299620.2 | Quercus robur | 100.0 | egn | (M=1) KOG0328//KOG0331//KOG0335//KOG0340//KOG0344//KOG0350//KOG0354//KOG0701//KOG0952//KOG1817 - Predicted ATP-dependent RNA helicase FAL1 involved in rRNA maturation DEAD-box superfamily [Translation ribosomal structure and biogenesis]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // DEAD-box ATP-dependent RNA helicase [RNA processing and modification]. // DEAD-box like helicase [General function prediction only]. // dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification]. // DNA/RNA helicase MER3/SLH1 DEAD-box superfamily [RNA processing and modification]. // Ribonuclease [RNA processing and modification]. | EC:3.1.26.3 | validated | |
| Qrob_P0301030.2 | Quercus robur | 100.0 | egn | (M=1) 3.1.26.12 - Ribonuclease E. | EC:3.1.26.12 | validated | |
| Qrob_P0311930.2 | Quercus robur | 90.2 | egn | (M=1) K14557 - U3 small nucleolar RNA-associated protein 6 | validated | ||
| Qrob_P0342330.2 | Quercus robur | 84.1 | egn | (M=2) K15191 - La-related protein 7 | validated | ||
| Qrob_P0366570.2 | Quercus robur | 38.1 | egn | (M=1) KOG0331//KOG0333//KOG0335//KOG0340//KOG0344//KOG0345//KOG0354//KOG0701//KOG1817//KOG3732 - ATP-dependent RNA helicase [RNA processing and modification]. // U5 snRNP-like RNA helicase subunit [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // ATP-dependent RNA helicase [RNA processing and modification]. // DEAD-box like helicase [General function prediction only]. // dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification]. // Ribonuclease [RNA processing and modification]. // Staufen and related double-stranded-RNA-binding proteins [Intracellular trafficking secretion and vesicular transport Transcription]. | EC:3.1.26.3 | validated | |
| Qrob_P0366580.2 | Quercus robur | 70.0 | egn | (M=1) PF00035//PF00636//PF14709 - Double-stranded RNA binding motif // Ribonuclease III domain // double strand RNA binding domain from DEAD END PROTEIN 1 | EC:3.1.26.3 | validated | |
| Qrob_P0367630.2 | Quercus robur | 100.0 | egn | (M=1) KOG0151//KOG2669 - Predicted splicing regulator contains RRM SWAP and RPR domains [General function prediction only]. // Regulator of nuclear mRNA [RNA processing and modification]. | validated | ||
| Qrob_P0390600.2 | Quercus robur | 100.0 | egn | (M=1) K12876 - RNA-binding protein 8A | validated | ||
| Qrob_P0406990.2 | Quercus robur | 0.0 | egn | (M=1) PTHR22792//PTHR22792:SF49 - LUPUS LA PROTEIN-RELATED // SUBFAMILY NOT NAMED | validated | ||
| Qrob_P0415690.2 | Quercus robur | 100.0 | egn | (M=1) K11145 - ribonuclease III family protein | validated |
355 Relations
| Relationship |
Parent Term . Identifier |
Child Term . Identifier |
|---|---|---|
| is_a | GO:0006396 | GO:0000154 |
| part of | GO:0006396 | GO:0000244 |
| part of | GO:0006396 | GO:0000245 |
| part of | GO:0006396 | GO:0000348 |
| part of | GO:0006396 | GO:0000349 |
| part of | GO:0006396 | GO:0000350 |
| part of | GO:0006396 | GO:0000352 |
| part of | GO:0006396 | GO:0000353 |
| part of | GO:0006396 | GO:0000354 |
| is_a | GO:0006396 | GO:0000365 |
| is_a | GO:0006396 | GO:0000366 |
| is_a | GO:0006396 | GO:0000372 |
| is_a | GO:0006396 | GO:0000373 |
| is_a | GO:0006396 | GO:0000374 |
| is_a | GO:0006396 | GO:0000375 |
| is_a | GO:0006396 | GO:0000376 |
| is_a | GO:0006396 | GO:0000377 |
| part of | GO:0006396 | GO:0000378 |
| is_a | GO:0006396 | GO:0000379 |
| part of | GO:0006396 | GO:0000379 |
| is_a | GO:0006396 | GO:0000380 |
| regulates | GO:0006396 | GO:0000381 |
| part of | GO:0006396 | GO:0000387 |
| part of | GO:0006396 | GO:0000388 |
| part of | GO:0006396 | GO:0000389 |
| part of | GO:0006396 | GO:0000390 |
| part of | GO:0006396 | GO:0000393 |
| is_a | GO:0006396 | GO:0000394 |
| part of | GO:0006396 | GO:0000395 |
| is_a | GO:0006396 | GO:0000398 |
