Protein : Qrob_P0097250.2 Q. robur
Protein Identifier  ? Qrob_P0097250.2 Organism . Name  Quercus robur
Score  96.3 Score Type  egn
Protein Description  (M=1) 2.1.1.185 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase. Code Enzyme  EC:2.1.1.185
Gene Prediction Quality  validated Protein length 

Sequence

Length: 360  
Kegg Orthology  K03437
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO:0008173 RNA methyltransferase activity Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259536 1 357 + 357 Gaps:29 71.46 459 76.52 6e-169 uncharacterized LOC100259536
blastp_kegg lcl|pmum:103335141 1 359 + 359 Gaps:27 99.71 343 70.76 5e-163 RNA methyltransferase-like protein 1B
blastp_kegg lcl|pper:PRUPE_ppa008148mg 1 359 + 359 Gaps:27 99.71 343 70.18 1e-161 hypothetical protein
blastp_kegg lcl|pxb:103954159 1 356 + 356 Gaps:27 99.12 340 70.33 7e-160 RNA methyltransferase-like protein 1B
blastp_kegg lcl|cic:CICLE_v10025907mg 1 359 + 359 Gaps:30 96.73 367 66.48 9e-159 hypothetical protein
blastp_kegg lcl|cit:102619635 1 359 + 359 Gaps:31 96.77 372 67.50 2e-156 uncharacterized LOC102619635
blastp_kegg lcl|fve:101305894 1 357 + 357 Gaps:31 99.40 332 70.30 2e-153 uncharacterized tRNA/rRNA methyltransferase slr1673-like
blastp_kegg lcl|rcu:RCOM_0410040 1 356 + 356 Gaps:19 99.12 342 65.19 2e-152 RNA binding protein putative
blastp_kegg lcl|tcc:TCM_000961 11 355 + 345 Gaps:34 98.03 356 65.62 4e-150 TRNA/rRNA methyltransferase family protein
blastp_kegg lcl|cam:101501432 59 356 + 298 Gaps:17 83.14 338 75.09 2e-145 uncharacterized LOC101501432
blastp_pdb 1ipa_A 59 349 + 291 Gaps:58 92.34 274 31.23 3e-11 mol:protein length:274 RNA 2'-O-RIBOSE METHYLTRANSFERASE
blastp_pdb 1gz0_H 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_G 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_F 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_E 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_D 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_C 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_B 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 1gz0_A 187 349 + 163 Gaps:31 55.34 253 37.14 4e-09 mol:protein length:253 HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
blastp_pdb 3gyq_B 187 355 + 169 Gaps:28 54.04 272 35.37 5e-09 mol:protein length:272 rRNA (adenosine-2'-O-)-methyltransferase
blastp_uniprot_sprot sp|P94538|YSGA_BACSU 56 352 + 297 Gaps:54 99.60 248 32.39 9e-18 Uncharacterized tRNA/rRNA methyltransferase YsgA OS Bacillus subtilis (strain 168) GN ysgA PE 3 SV 2
blastp_uniprot_sprot sp|P74261|Y1673_SYNY3 51 349 + 299 Gaps:54 94.53 274 35.91 2e-17 Uncharacterized tRNA/rRNA methyltransferase slr1673 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN slr1673 PE 3 SV 1
blastp_uniprot_sprot sp|Q8Y016|RLMB_RALSO 91 359 + 269 Gaps:54 90.36 249 33.33 3e-12 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB OS Ralstonia solanacearum (strain GMI1000) GN rlmB PE 3 SV 1
blastp_uniprot_sprot sp|B1MGY6|Y572_MYCA9 209 348 + 140 Gaps:22 41.90 315 39.39 3e-10 Uncharacterized tRNA/rRNA methyltransferase MAB_0572 OS Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN MAB_0572 PE 3 SV 1
blastp_uniprot_sprot sp|Q7MYU6|RLMB_PHOLL 187 349 + 163 Gaps:27 57.38 244 36.43 4e-10 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB OS Photorhabdus luminescens subsp. laumondii (strain TT01) GN rlmB PE 3 SV 1
blastp_uniprot_sprot sp|Q9CCW4|Y324_MYCLE 209 348 + 140 Gaps:14 42.72 309 37.88 4e-10 Uncharacterized tRNA/rRNA methyltransferase ML0324 OS Mycobacterium leprae (strain TN) GN ML0324 PE 3 SV 2
blastp_uniprot_sprot sp|B8ZUB0|Y324_MYCLB 209 348 + 140 Gaps:14 42.72 309 37.88 4e-10 Uncharacterized tRNA/rRNA methyltransferase MLBr00324 OS Mycobacterium leprae (strain Br4923) GN MLBr00324 PE 3 SV 2
blastp_uniprot_sprot sp|A0QAB6|Y574_MYCA1 209 348 + 140 Gaps:10 42.72 309 38.64 6e-10 Uncharacterized tRNA/rRNA methyltransferase MAV_0574 OS Mycobacterium avium (strain 104) GN MAV_0574 PE 3 SV 1
blastp_uniprot_sprot sp|B2HJ20|Y5079_MYCMM 209 348 + 140 Gaps:10 42.58 310 37.12 7e-10 Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS Mycobacterium marinum (strain ATCC BAA-535 / M) GN MMAR_5079 PE 3 SV 1
blastp_uniprot_sprot sp|A0PV26|Y4155_MYCUA 209 348 + 140 Gaps:10 42.58 310 37.12 7e-10 Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS Mycobacterium ulcerans (strain Agy99) GN MUL_4155 PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 59 156 98 SSF55315 none none IPR029064
PANTHER 210 352 143 PTHR12029:SF50 none none none
PANTHER 210 352 143 PTHR12029 none none none
PANTHER 71 194 124 PTHR12029 none none none
Gene3D 210 352 143 G3DSA:3.40.1280.10 none none IPR029026
PANTHER 71 194 124 PTHR12029:SF50 none none none
SUPERFAMILY 209 350 142 SSF75217 none none IPR029028
Gene3D 58 157 100 G3DSA:3.30.1330.30 none none IPR029064
Pfam 210 349 140 PF00588 none SpoU rRNA Methylase family IPR001537

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting