QTLTerm :

Qtl Name  Bourran2_2014_nEpis*_3P Chromosome Name  Qrob_Chr08
Linkage Group  8 Prox Marker  s_1DA4QW_688
Dist Marker  s_1DNI7D_820 Position QTL  17,96
Pos One  0 Pos Two  37,75
Test Type  lod Test Value  2,9745
R 2  7,5 QTL Detection Name  nEpis_3P_2014

2592 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0004640.2 Quercus robur 98.0 egn (M=7) PTHR10071//PTHR10071:SF161 - TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR) // SUBFAMILY NOT NAMED (PTHR10071:SF161)     validated
Qrob_P0004680.2 Quercus robur 100.0 egn (M=1) PTHR24420//PTHR24420:SF595 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED   EC:2.7.11.1 validated
Qrob_P0004690.2 Quercus robur 100.0 egn (M=1) KOG0113//KOG0147//KOG0151//KOG0670//KOG0794//KOG0834//KOG0835//KOG2888//KOG4676 - U1 small nuclear ribonucleoprotein (RRM superfamily) [RNA processing and modification]. // Transcriptional coactivator CAPER (RRM superfamily) [Transcription]. // Predicted splicing regulator contains RRM SWAP and RPR domains [General function prediction only]. // U4/U6-associated splicing factor PRP4 [RNA processing and modification]. // CDK8 kinase-activating protein cyclin C [Transcription]. // CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. // Putative RNA binding protein [General function prediction only]. // Splicing factor arginine/serine-rich [RNA processing and modification].     validated
Qrob_P0004890.2 Quercus robur 100.0 egn (M=4) 2.3.1.74 - Naringenin-chalcone synthase.   EC:2.3.1.74 validated
Qrob_P0004910.2 Quercus robur 100.0 egn (M=2) PTHR10566:SF10 - ABC1 FAMILY PROTEIN KINASE   EC:3.6.3.46 validated
Qrob_P0004920.2 Quercus robur 93.2 egn (M=2) PTHR10566:SF10 - ABC1 FAMILY PROTEIN KINASE   EC:3.6.3.46 validated
Qrob_P0004940.2 Quercus robur 100.0 egn (M=15) PTHR23083 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR     validated
Qrob_P0004950.2 Quercus robur 100.0 egn (M=1) 2.4.1.132 - GDP-Man:Man(1)GlcNAc(2)-PP-dolichol alpha-1,3-mannosyltransferase.   EC:2.4.1.132, EC:2.4.1.257 validated
Qrob_P0005000.2 Quercus robur 0.0 egn (M=8) KOG1969 - DNA replication checkpoint protein CHL12/CTF18 [Energy production and conversion Replication recombination and repair].     validated
Qrob_P0005010.2 Quercus robur 0.0 egn (M=1) PTHR13779:SF25 - HOLLIDAY JUNCTION ATP-DEPENDENT DNA HELICASE RUVB (PTHR13779:SF25)     validated
Qrob_P0005020.2 Quercus robur 0.0 egn (M=1) PTHR23389:SF3 - CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOG (PTHR23389:SF3)     validated
Qrob_P0005030.2 Quercus robur 41.0 egn       validated
Qrob_P0005060.2 Quercus robur 46.0 egn (M=1) K18881 - D-lactate dehydratase [EC:4.2.1.130]   EC:4.4.1.5 validated
Qrob_P0005090.2 Quercus robur 96.0 egn (M=1) KOG0263//KOG0266//KOG0271//KOG0272//KOG0276//KOG0279//KOG0292//KOG0295//KOG0319//KOG0974 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Vesicle coat complex COPI beta' subunit [Intracellular trafficking secretion and vesicular transport]. // G protein beta subunit-like protein [Signal transduction mechanisms]. // Vesicle coat complex COPI alpha subunit [Intracellular trafficking secretion and vesicular transport]. // WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. // WD-repeat protein WDR6 WD repeat superfamily [General function prediction only].     validated
Qrob_P0005100.2 Quercus robur 100.0 egn (M=2) PTHR12654//PTHR12654:SF0 - BILE ACID BETA-GLUCOSIDASE-RELATED // SUBFAMILY NOT NAMED   EC:3.2.1.45 validated
Qrob_P0005110.2 Quercus robur 100.0 egn (M=2) PTHR12654//PTHR12654:SF0 - BILE ACID BETA-GLUCOSIDASE-RELATED // SUBFAMILY NOT NAMED   EC:3.2.1.45 validated
Qrob_P0005150.2 Quercus robur 0.0 egn (M=29) PF04578//PF13968 - Protein of unknown function, DUF594 // Domain of unknown function (DUF4220)     validated
Qrob_P0005160.2 Quercus robur 0.0 egn (M=2) K17338 - receptor expression-enhancing protein 1/2/3/4     validated
Qrob_P0005170.2 Quercus robur 98.1 egn (M=1) PTHR24361//PTHR24361:SF229 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED   EC:2.7.11.1 validated
Qrob_P0005180.2 Quercus robur 100.0 egn (M=3) K10839 - UV excision repair protein RAD23     validated
Qrob_P0005190.2 Quercus robur 100.0 egn       validated
Qrob_P0005690.2 Quercus robur 3.0 egn (M=3) K04728 - ataxia telangectasia mutated family protein [EC:2.7.11.1]   EC:2.7.11.1 validated
Qrob_P0005700.2 Quercus robur 18.0 egn (M=1) KOG0889//KOG0890//KOG0891//KOG0892//KOG0903//KOG0904//KOG0905//KOG0906 - Histone acetyltransferase SAGA TRRAP/TRA1 component PI-3 kinase superfamily [Signal transduction mechanisms Chromatin structure and dynamics Replication recombination and repair Cell cycle control cell division chromosome partitioning]. // Protein kinase of the PI-3 kinase family involved in mitotic growth DNA repair and meiotic recombination [Signal transduction mechanisms Chromatin structure and dynamics Replication recombination and repair Cell cycle control cell division chromosome partitioning]. // DNA-dependent protein kinase [Replication recombination and repair]. // Protein kinase ATM/Tel1 involved in telomere length regulation and DNA repair [Signal transduction mechanisms Chromatin structure and dynamics Replication recombination and repair Cell cycle control cell division chromosome partitioning]. // Phosphatidylinositol 4-kinase involved in intracellular trafficking and secretion [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]. // Phosphoinositide 3-kinase [Signal transduction mechanisms]. // Phosphatidylinositol 3-kinase VPS34 involved in signal transduction [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].   EC:2.7.11.1 validated
Qrob_P0005720.2 Quercus robur 12.0 egn (M=8) 2.4.2.30 - NAD(+) ADP-ribosyltransferase.   EC:2.4.2.30 validated
Qrob_P0005730.2 Quercus robur 16.5 egn (M=7) PF07816 - Protein of unknown function (DUF1645)     validated
Qrob_P0005740.2 Quercus robur 54.0 egn (M=2) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing).   EC:6.3.5.5 validated
Qrob_P0005750.2 Quercus robur 100.0 egn (M=2) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase     validated
Qrob_P0005760.2 Quercus robur 100.0 egn (M=1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase.   EC:1.1.1.267 validated
Qrob_P0005790.2 Quercus robur 71.1 egn (M=2) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED (PTHR11002:SF7)   EC:4.2.1.1 validated
Qrob_P0005800.2 Quercus robur     (M=2) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED (PTHR11002:SF7) Qrob_P0318425.1 EC:4.2.1.1 manual_v1