Protein : Qrob_P0005760.2 Q. robur
Protein Identifier  ? Qrob_P0005760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase. Code Enzyme  EC:1.1.1.267
Gene Prediction Quality  validated Protein length 

Sequence

Length: 474  
Kegg Orthology  K00099
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0008299 isoprenoid biosynthetic process The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH.
GO:0070402 NADPH binding Interacting selectively and non-covalently with the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101301390 1 473 + 473 Gaps:2 100.00 471 88.96 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1510580 1 473 + 473 Gaps:6 100.00 467 89.29 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplast precursor putative (EC:1.1.1.267)
blastp_kegg lcl|vvi:100248516 1 473 + 473 Gaps:2 100.00 471 88.75 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0012s08230g 1 473 + 473 Gaps:8 100.00 471 89.17 0.0 POPTRDRAFT_728585 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein
blastp_kegg lcl|mdm:103437717 1 473 + 473 Gaps:2 100.00 473 87.74 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic
blastp_kegg lcl|pop:POPTR_0015s08740g 1 473 + 473 Gaps:8 100.00 471 88.96 0.0 POPTRDRAFT_733324 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein
blastp_kegg lcl|gmx:100790607 1 473 + 473 Gaps:3 100.00 474 86.50 0.0 DXR1 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic-like
blastp_kegg lcl|mdm:103455221 1 473 + 473 Gaps:2 100.00 473 86.47 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic-like
blastp_kegg lcl|sly:543682 1 472 + 472 Gaps:4 99.79 475 86.08 0.0 DXR 1-deoxy-D-xylulose-5-phosphate reductoisomerase
blastp_kegg lcl|pmum:103338344 1 473 + 473 Gaps:4 100.00 473 86.26 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic
blastp_pdb 1r0l_D 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0l_C 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0l_B 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0l_A 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0k_D 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0k_C 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0k_B 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 1r0k_A 76 465 + 390 Gaps:8 98.45 388 45.81 2e-107 mol:protein length:388 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 3iie_B 77 462 + 386 Gaps:17 97.51 401 45.78 2e-100 mol:protein length:401 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_pdb 3iie_A 77 462 + 386 Gaps:17 97.51 401 45.78 2e-100 mol:protein length:401 1-deoxy-D-xylulose 5-phosphate reductoisomera
blastp_uniprot_sprot sp|Q8W250|DXR_ORYSJ 1 471 + 471 Gaps:4 99.58 473 86.62 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic OS Oryza sativa subsp. japonica GN DXR PE 2 SV 2
blastp_uniprot_sprot sp|Q9XFS9|DXR_ARATH 1 473 + 473 Gaps:7 99.79 477 85.08 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic OS Arabidopsis thaliana GN DXR PE 2 SV 2
blastp_uniprot_sprot sp|Q9XES0|DXR_MENPI 6 472 + 467 Gaps:4 99.79 470 82.94 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase chloroplastic OS Mentha piperita GN DXR PE 2 SV 2
blastp_uniprot_sprot sp|Q8YP49|DXR_NOSS1 77 470 + 394 Gaps:3 97.99 399 65.73 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|Q3MDL2|DXR_ANAVT 77 470 + 394 Gaps:3 98.24 398 65.98 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|B2ITX3|DXR_NOSP7 77 464 + 388 Gaps:3 96.73 398 67.01 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|B0CD21|DXR_ACAM1 77 473 + 397 Gaps:7 99.25 401 65.08 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Acaryochloris marina (strain MBIC 11017) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|B8HVK1|DXR_CYAP4 77 457 + 381 Gaps:3 97.67 387 67.46 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|B7K5G6|DXR_CYAP8 77 457 + 381 Gaps:3 94.97 398 66.14 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Cyanothece sp. (strain PCC 8801) GN dxr PE 3 SV 1
blastp_uniprot_sprot sp|Q9RCT1|DXR_SYNP6 77 465 + 389 Gaps:13 98.51 402 63.64 0.0 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN dxr PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 54 473 420 PTHR30525:SF2 none none none
SUPERFAMILY 369 463 95 SSF69055 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" none IPR026877
PIRSF 76 469 394 PIRSF006205 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" none IPR003821
SUPERFAMILY 202 339 138 SSF55347 none none none
SUPERFAMILY 76 225 150 SSF51735 none none none
Pfam 221 304 84 PF08436 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal IPR013644
Gene3D 70 225 156 G3DSA:3.40.50.720 none none IPR016040
Pfam 336 459 124 PF13288 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" DXP reductoisomerase C-terminal domain IPR026877
TIGRFAM 77 459 383 TIGR00243 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase IPR003821
PANTHER 54 473 420 PTHR30525 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056";signature_desc=1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE none IPR003821
Pfam 79 207 129 PF02670 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" 1-deoxy-D-xylulose 5-phosphate reductoisomerase IPR013512
Hamap 79 462 384 MF_00183 "KEGG:00900+1.1.1.267","MetaCyc:PWY-7560","UniPathway:UPA00056" 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. IPR003821
Gene3D 382 463 82 G3DSA:1.10.1740.10 none none none

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting