Protein : Qrob_P0005690.2 Q. robur
Protein Identifier  ? Qrob_P0005690.2 Organism . Name  Quercus robur
Score  3.0 Score Type  egn
Protein Description  (M=3) K04728 - ataxia telangectasia mutated family protein [EC:2.7.11.1] Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 426  
Kegg Orthology  K04728
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0015s08780g 6 420 + 415 Gaps:1 42.37 977 75.60 0.0 hypothetical protein
blastp_kegg lcl|vvi:100250198 1 420 + 420 Gaps:1 14.17 2956 78.76 0.0 serine/threonine-protein kinase ATM-like
blastp_kegg lcl|pmum:103338375 1 411 + 411 Gaps:1 9.93 4149 79.13 0.0 serine/threonine-protein kinase ATM
blastp_kegg lcl|fve:101295891 1 411 + 411 Gaps:1 13.36 3068 76.83 0.0 serine/threonine-protein kinase ATM-like
blastp_kegg lcl|rcu:RCOM_1510550 1 411 + 411 Gaps:1 13.88 2954 75.12 0.0 ataxia telangiectasia mutated putative (EC:2.7.11.1)
blastp_kegg lcl|tcc:TCM_012074 1 420 + 420 Gaps:2 13.82 3039 76.19 0.0 Ataxia telangiectasia mutated putative
blastp_kegg lcl|pper:PRUPE_ppa000124mg 8 411 + 404 Gaps:11 23.87 1722 74.94 0.0 hypothetical protein
blastp_kegg lcl|csv:101224901 1 420 + 420 Gaps:3 57.20 729 69.06 0.0 serine/threonine-protein kinase ATM-like
blastp_kegg lcl|cit:102620162 3 420 + 418 Gaps:3 13.70 3029 74.22 0.0 serine/threonine-protein kinase ATM-like
blastp_kegg lcl|cic:CICLE_v10018427mg 3 420 + 418 Gaps:3 14.17 2928 73.73 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9M3G7|ATM_ARATH 3 411 + 409 Gaps:1 10.58 3856 64.46 2e-175 Serine/threonine-protein kinase ATM OS Arabidopsis thaliana GN ATM PE 2 SV 1
blastp_uniprot_sprot sp|Q13315|ATM_HUMAN 4 357 + 354 Gaps:89 10.11 3056 32.36 1e-23 Serine-protein kinase ATM OS Homo sapiens GN ATM PE 1 SV 4
blastp_uniprot_sprot sp|Q6PQD5|ATM_PIG 4 357 + 354 Gaps:87 10.11 3057 32.04 3e-22 Serine-protein kinase ATM OS Sus scrofa GN ATM PE 3 SV 2
blastp_uniprot_sprot sp|Q62388|ATM_MOUSE 6 291 + 286 Gaps:64 8.61 3066 30.68 3e-21 Serine-protein kinase ATM OS Mus musculus GN Atm PE 1 SV 2
blastp_uniprot_sprot sp|Q9DE14|ATR_XENLA 43 387 + 345 Gaps:84 10.81 2654 30.66 4e-09 Serine/threonine-protein kinase atr OS Xenopus laevis GN atr PE 1 SV 2
blastp_uniprot_sprot sp|Q7RZT9|ATM_NEUCR 3 125 + 123 Gaps:19 4.22 2939 29.84 3e-07 Serine/threonine-protein kinase tel1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN mus-21 PE 3 SV 2
rpsblast_kog gnl|CDD|36110 9 425 + 417 Gaps:59 13.97 2806 28.32 3e-60 KOG0892 KOG0892 KOG0892 Protein kinase ATM/Tel1 involved in telomere length regulation and DNA repair [Signal transduction mechanisms Chromatin structure and dynamics Replication recombination and repair Cell cycle control cell division chromosome partitioning].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 131 293 163 PTHR11139 none none none
PANTHER 321 393 73 PTHR11139 none none none
PANTHER 6 114 109 PTHR11139 none none none
Pfam 191 389 199 PF02259 none FAT domain IPR003151
ProSiteProfiles 18 425 408 PS51189 none FAT domain profile. IPR014009

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 5 0.586 0.028 NON-PLANT 22