Protein : Qrob_P0005150.2 Q. robur
Protein Identifier  ? Qrob_P0005150.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=29) PF04578//PF13968 - Protein of unknown function, DUF594 // Domain of unknown function (DUF4220) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 677  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

0 GO Terms

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa026837mg 17 617 + 601 Gaps:138 98.37 735 43.15 2e-162 hypothetical protein
blastp_kegg lcl|vvi:100241320 7 611 + 605 Gaps:78 97.74 664 40.99 6e-129 uncharacterized LOC100241320
blastp_kegg lcl|mdm:103426202 3 611 + 609 Gaps:108 98.44 706 37.55 6e-126 uncharacterized LOC103426202
blastp_kegg lcl|pxb:103939247 3 611 + 609 Gaps:147 98.43 701 37.83 4e-125 uncharacterized LOC103939247
blastp_kegg lcl|pper:PRUPE_ppa015371mg 19 617 + 599 Gaps:95 99.13 690 38.30 1e-124 hypothetical protein
blastp_kegg lcl|sot:102605257 14 608 + 595 Gaps:95 96.26 696 40.30 1e-123 uncharacterized LOC102605257
blastp_kegg lcl|vvi:100252444 7 611 + 605 Gaps:74 80.23 799 40.25 1e-120 uncharacterized LOC100252444
blastp_kegg lcl|vvi:100259488 7 611 + 605 Gaps:167 92.65 1266 39.56 3e-120 uncharacterized LOC100259488
blastp_kegg lcl|sly:101249163 14 608 + 595 Gaps:86 96.26 695 39.16 3e-119 uncharacterized LOC101249163
blastp_kegg lcl|fve:101298623 6 611 + 606 Gaps:101 98.01 703 38.17 2e-115 uncharacterized protein LOC101298623
rpsblast_cdd gnl|CDD|206138 68 334 + 267 Gaps:51 85.64 362 37.10 1e-63 pfam13968 DUF4220 Domain of unknown function (DUF4220). This family is found in plants and is often associated with DUF294 pfam04578.
rpsblast_cdd gnl|CDD|191035 545 603 + 59 Gaps:1 98.31 59 43.10 7e-13 pfam04578 DUF594 Protein of unknown function DUF594.

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 469 490 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 126 131 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 132 150 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 5 631 627 PTHR31325 none none none
Phobius 156 174 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 234 335 102 PF13968 none Domain of unknown function (DUF4220) IPR025315
Pfam 68 189 122 PF13968 none Domain of unknown function (DUF4220) IPR025315
Phobius 106 125 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 34 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 491 676 186 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 278 297 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 87 105 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 66 86 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 175 277 103 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 5 631 627 PTHR31325:SF0 none none none
Phobius 35 54 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 55 65 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 309 329 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 298 308 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 548 602 55 PF04578 none Protein of unknown function, DUF594 IPR007658
Phobius 330 468 139 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 151 155 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

8 Localization

Analysis Start End Length
TMHMM 35 54 19
TMHMM 130 152 22
TMHMM 66 88 22
TMHMM 276 298 22
TMHMM 470 492 22
TMHMM 103 125 22
TMHMM 308 330 22
TMHMM 157 174 17

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 15   Secretory pathway 2 0.874 0.203 NON-PLANT 15