Protein : Qrob_P0102680.2 Q. robur
Protein Identifier  ? Qrob_P0102680.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=3) 2.7.7.72 - CCA tRNA nucleotidyltransferase. Code Enzyme  EC:2.7.7.72
Gene Prediction Quality  validated Protein length 

Sequence

Length: 598  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103329795 42 581 + 540 Gaps:5 93.53 572 74.77 0.0 putative CCA tRNA nucleotidyltransferase 2
blastp_kegg lcl|pper:PRUPE_ppa004187mg 67 581 + 515 none 98.28 524 76.31 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_036384 46 581 + 536 Gaps:8 90.10 586 76.52 0.0 Polynucleotide adenylyltransferase family protein isoform 1
blastp_kegg lcl|csv:101216479 55 579 + 525 Gaps:1 90.81 577 74.81 0.0 CCA tRNA nucleotidyltransferase mitochondrial-like
blastp_kegg lcl|rcu:RCOM_0261900 44 581 + 538 Gaps:11 92.72 577 73.64 0.0 poly(A) polymerase putative (EC:2.7.7.25)
blastp_kegg lcl|cmo:103496556 9 579 + 571 Gaps:10 97.23 577 71.48 0.0 putative CCA tRNA nucleotidyltransferase 2
blastp_kegg lcl|pop:POPTR_0013s11570g 54 581 + 528 Gaps:1 99.81 528 71.54 0.0 tRNA-nucleotidyltransferase family protein
blastp_kegg lcl|cic:CICLE_v10000691mg 18 581 + 564 Gaps:6 97.41 579 69.86 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G088400g 13 581 + 569 Gaps:10 95.10 592 69.63 0.0 hypothetical protein
blastp_kegg lcl|cit:102621272 18 574 + 557 Gaps:10 96.20 579 70.92 0.0 CCA tRNA nucleotidyltransferase mitochondrial-like
blastp_pdb 3h3a_B 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h3a_A 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h39_B 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h39_A 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h38_A 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h37_B 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 3h37_A 100 340 + 241 Gaps:30 51.02 441 32.00 4e-14 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_pdb 1vfg_B 100 291 + 192 Gaps:35 46.41 390 33.70 1e-13 mol:protein length:390 poly A polymerase
blastp_pdb 1vfg_A 100 291 + 192 Gaps:35 46.41 390 33.70 1e-13 mol:protein length:390 poly A polymerase
blastp_pdb 3aqm_B 100 338 + 239 Gaps:14 54.22 415 31.11 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_uniprot_sprot sp|Q9P4S5|CCA1_CANGA 71 571 + 501 Gaps:111 96.05 531 36.47 7e-79 CCA tRNA nucleotidyltransferase mitochondrial OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN CCA1 PE 1 SV 2
blastp_uniprot_sprot sp|P21269|CCA1_YEAST 53 571 + 519 Gaps:82 96.52 546 36.05 4e-74 CCA tRNA nucleotidyltransferase mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CCA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y7U9|CCA2_SCHPO 71 571 + 501 Gaps:80 98.55 484 35.64 1e-70 Putative CCA tRNA nucleotidyltransferase 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC645.10 PE 3 SV 1
blastp_uniprot_sprot sp|Q9UTQ0|CCA1_SCHPO 72 578 + 507 Gaps:45 98.00 500 34.49 3e-70 Putative CCA tRNA nucleotidyltransferase 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC1093.04c PE 3 SV 2
blastp_uniprot_sprot sp|Q88W02|CCA_LACPL 102 319 + 218 Gaps:30 48.16 407 34.18 2e-16 CCA-adding enzyme OS Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN cca PE 3 SV 1
blastp_uniprot_sprot sp|P44439|PCNB_HAEIN 100 381 + 282 Gaps:57 59.07 452 30.34 7e-15 Poly(A) polymerase I OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN pcnB PE 3 SV 1
blastp_uniprot_sprot sp|Q03Y57|CCA_LEUMM 102 370 + 269 Gaps:36 61.10 401 33.06 2e-14 CCA-adding enzyme OS Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN cca PE 3 SV 1
blastp_uniprot_sprot sp|Q02Y22|CCA_LACLS 101 330 + 230 Gaps:29 51.49 402 30.43 3e-14 CCA-adding enzyme OS Lactococcus lactis subsp. cremoris (strain SK11) GN cca PE 3 SV 1
blastp_uniprot_sprot sp|A8FEH9|CCA_BACP2 97 320 + 224 Gaps:24 50.50 400 32.67 3e-14 CCA-adding enzyme OS Bacillus pumilus (strain SAFR-032) GN cca PE 3 SV 1
blastp_uniprot_sprot sp|A2RJT1|CCA_LACLM 102 330 + 229 Gaps:29 51.24 402 30.58 3e-14 CCA-adding enzyme OS Lactococcus lactis subsp. cremoris (strain MG1363) GN cca PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 380 582 203 PTHR13734 none none none
PANTHER 69 350 282 PTHR13734 none none none
Pfam 99 236 138 PF01743 none Poly A polymerase head domain IPR002646
Gene3D 234 424 191 G3DSA:1.10.3090.10 none none none
PANTHER 380 582 203 PTHR13734:SF5 none none none
Gene3D 88 233 146 G3DSA:3.30.460.10 none none none
SUPERFAMILY 453 572 120 SSF81891 none none none
SUPERFAMILY 236 422 187 SSF81891 none none none
PANTHER 69 350 282 PTHR13734:SF5 none none none
SUPERFAMILY 77 233 157 SSF81301 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Mitochondrion 4 0.032 0.726 NON-PLANT 25