Protein : Qrob_P0247550.2 Q. robur
Protein Identifier  ? Qrob_P0247550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0307//KOG0566//KOG1923//KOG1924//KOG1984//KOG1985//KOG4672 - Vesicle coat complex COPII subunit SEC31 [Intracellular trafficking secretion and vesicular transport]. // Inositol-1 4 5-triphosphate 5-phosphatase (synaptojanin) INP51/INP52/INP53 family [Intracellular trafficking secretion and vesicular transport]. // Rac1 GTPase effector FRL [Signal transduction mechanisms Cytoskeleton]. // RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms Cytoskeleton]. // Vesicle coat complex COPII subunit SFB3 [Intracellular trafficking secretion and vesicular transport]. // Vesicle coat complex COPII subunit SEC24/subunit SFB2 [Intracellular trafficking secretion and vesicular transport]. // Uncharacterized conserved low complexity protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 493  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004051mg 1 472 + 472 Gaps:15 86.87 533 73.87 9e-149 hypothetical protein
blastp_kegg lcl|pmum:103338254 1 472 + 472 Gaps:15 86.92 535 72.69 2e-147 WW domain-binding protein 11
blastp_kegg lcl|mdm:103420328 1 472 + 472 Gaps:24 86.99 538 75.64 3e-146 WW domain-binding protein 11-like
blastp_kegg lcl|tcc:TCM_013720 1 483 + 483 Gaps:16 88.42 544 74.84 4e-146 Proline-rich family protein isoform 1
blastp_kegg lcl|pxb:103958776 1 472 + 472 Gaps:23 86.96 537 76.02 8e-143 protein enabled homolog
blastp_kegg lcl|cit:102626984 1 472 + 472 Gaps:23 86.48 540 71.73 7e-139 formin-like protein 5-like
blastp_kegg lcl|gmx:100792892 1 472 + 472 Gaps:17 86.80 538 72.38 6e-138 formin-like protein 5-like
blastp_kegg lcl|pxb:103935406 1 472 + 472 Gaps:22 86.89 534 75.00 1e-137 WW domain-binding protein 11-like
blastp_kegg lcl|csv:101216276 1 472 + 472 Gaps:12 86.73 535 70.69 6e-137 uncharacterized LOC101216276
blastp_kegg lcl|cam:101497894 1 472 + 472 Gaps:17 86.65 532 72.89 7e-137 formin-like protein 5-like
blastp_uniprot_sprot sp|Q6P0D5|WBP11_DANRE 3 127 + 125 Gaps:29 21.25 640 36.76 7e-11 WW domain-binding protein 11 OS Danio rerio GN wbp11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y2W2|WBP11_HUMAN 3 84 + 82 Gaps:5 13.57 641 41.38 3e-10 WW domain-binding protein 11 OS Homo sapiens GN WBP11 PE 1 SV 1
blastp_uniprot_sprot sp|Q923D5|WBP11_MOUSE 3 84 + 82 Gaps:5 13.57 641 41.38 3e-10 WW domain-binding protein 11 OS Mus musculus GN Wbp11 PE 1 SV 2
blastp_uniprot_sprot sp|Q5PQQ2|WBP11_RAT 3 84 + 82 Gaps:5 13.57 641 41.38 4e-10 WW domain-binding protein 11 OS Rattus norvegicus GN Wbp11 PE 2 SV 1
rpsblast_cdd gnl|CDD|192292 7 84 + 78 none 100.00 78 47.44 8e-27 pfam09429 Wbp11 WW domain binding protein 11. The WW domain is a small protein module with a triple-stranded beta-sheet fold. This is a family of WW domain binding proteins.
rpsblast_cdd gnl|CDD|165506 108 470 + 363 Gaps:307 19.39 3151 52.54 1e-14 PHA03247 PHA03247 large tegument protein UL36 Provisional.
rpsblast_cdd gnl|CDD|204310 129 464 + 336 Gaps:101 34.33 804 38.04 2e-09 pfam09770 PAT1 Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.
rpsblast_cdd gnl|CDD|183438 159 385 + 227 Gaps:19 30.29 700 20.75 1e-08 PRK12323 PRK12323 DNA polymerase III subunits gamma and tau Provisional.
rpsblast_cdd gnl|CDD|191053 140 324 + 185 Gaps:10 42.54 315 44.78 1e-07 pfam04652 DUF605 Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region.
rpsblast_cdd gnl|CDD|184914 152 259 + 108 Gaps:15 15.90 585 26.88 2e-07 PRK14950 PRK14950 DNA polymerase III subunits gamma and tau Provisional.
rpsblast_cdd gnl|CDD|184915 138 274 + 137 Gaps:7 21.04 618 20.00 3e-07 PRK14951 PRK14951 DNA polymerase III subunits gamma and tau Provisional.
rpsblast_cdd gnl|CDD|181106 140 434 + 295 Gaps:45 24.51 824 28.22 6e-07 PRK07764 PRK07764 DNA polymerase III subunits gamma and tau Validated.
rpsblast_kog gnl|CDD|39871 1 472 + 472 Gaps:52 88.30 487 34.65 1e-27 KOG4672 KOG4672 KOG4672 Uncharacterized conserved low complexity protein [Function unknown].
rpsblast_kog gnl|CDD|37135 156 428 + 273 Gaps:160 11.34 1102 68.80 5e-13 KOG1924 KOG1924 KOG1924 RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms Cytoskeleton].
rpsblast_kog gnl|CDD|37195 133 445 + 313 Gaps:164 26.81 1007 45.93 2e-11 KOG1984 KOG1984 KOG1984 Vesicle coat complex COPII subunit SFB3 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|35528 131 443 + 313 Gaps:105 24.59 1049 36.82 4e-11 KOG0307 KOG0307 KOG0307 Vesicle coat complex COPII subunit SEC31 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|35786 84 444 + 361 Gaps:166 22.31 1080 43.57 6e-10 KOG0566 KOG0566 KOG0566 Inositol-1 4 5-triphosphate 5-phosphatase (synaptojanin) INP51/INP52/INP53 family [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37134 199 317 + 119 Gaps:7 14.46 830 27.50 2e-08 KOG1923 KOG1923 KOG1923 Rac1 GTPase effector FRL [Signal transduction mechanisms Cytoskeleton].
rpsblast_kog gnl|CDD|37196 180 373 + 194 Gaps:24 20.18 887 41.34 1e-07 KOG1985 KOG1985 KOG1985 Vesicle coat complex COPII subunit SEC24/subunit SFB2 [Intracellular trafficking secretion and vesicular transport].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 72 93 22 Coil none none none
Pfam 7 84 78 PF09429 none WW domain binding protein 11 IPR019007
PANTHER 1 472 472 PTHR13361:SF1 none none none
PANTHER 1 472 472 PTHR13361 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting