GO Term : GO:0006139 nucleobase-containing compound metabolic process GO

Namespace  biological_process Obsolete  false
description  Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.

0 Cross References

1 Ontology

Name
GO

12 Parents

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.

25 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0038400.2 Quercus robur 0.0 egn (M=2) K18740 - exonuclease 3'-5' domain-containing protein 1     validated
Qrob_P0041030.2 Quercus robur 97.0 egn (M=1) PTHR13620:SF2 - gb def: cg6744 gene product [drosophila melanogaster]   EC:3.6.4.12 validated
Qrob_P0041470.2 Quercus robur 84.0 egn (M=2) PTHR13620//PTHR13620:SF3 - 3-5 EXONUCLEASE // SUBFAMILY NOT NAMED   EC:3.6.4.12 validated
Qrob_P0041480.2 Quercus robur 100.0 egn (M=2) PTHR13620//PTHR13620:SF3 - 3-5 EXONUCLEASE // SUBFAMILY NOT NAMED   EC:3.6.4.12 validated
Qrob_P0093060.2 Quercus robur 89.0 egn (M=1) PF05191 - Adenylate kinase, active site lid   EC:2.7.4.3 validated
Qrob_P0093440.2 Quercus robur 89.3 egn (M=2) PTHR23359//PTHR23359:SF84 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED (PTHR23359:SF84)   EC:2.7.4.3 validated
Qrob_P0120240.2 Quercus robur 100.0 egn (M=1) K12591 - exosome complex exonuclease RRP6 [EC:3.1.13.-]     validated
Qrob_P0125250.2 Quercus robur 29.2 egn (M=5) K11292 - transcription elongation factor SPT6     validated
Qrob_P0152730.2 Quercus robur 100.0 egn (M=1) PTHR13107 - KARYOGAMY PROTEIN KAR4-RELATED   EC:2.1.1.62 validated
Qrob_P0235540.2 Quercus robur 100.0 egn (M=2) PTHR23359//PTHR23359:SF84 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED (PTHR23359:SF84)   EC:2.7.4.3 validated
Qrob_P0253480.2 Quercus robur 0.0 egn (M=9) PF01612 - 3'-5' exonuclease     validated
Qrob_P0255420.2 Quercus robur 30.2 egn (M=2) K07447 - putative holliday junction resolvase [EC:3.1.-.-]     validated
Qrob_P0260930.2 Quercus robur 100.0 egn (M=2) PTHR23359:SF78 - ADENYLATE KINASE (PTHR23359:SF78)   EC:2.7.4.3 validated
Qrob_P0391170.2 Quercus robur 85.1 egn (M=5) K11292 - transcription elongation factor SPT6     validated
Qrob_P0391180.2 Quercus robur 93.1 egn (M=5) K11292 - transcription elongation factor SPT6     validated
Qrob_P0464620.2 Quercus robur 100.0 egn (M=1) 2.7.4.14 - UMP/CMP kinase.   EC:2.7.4.14 validated
Qrob_P0478080.2 Quercus robur 100.0 egn (M=1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13]   EC:3.6.4.13 validated
Qrob_P0516210.2 Quercus robur 100.0 egn (M=1) PTHR23359:SF72 - ADENYLATE KINASE FAMILY PROTEIN (PTHR23359:SF72)   EC:2.7.4.3 validated
Qrob_P0532980.2 Quercus robur 100.0 egn (M=1) PTHR14475 - DROSOPHILA MELANOGASTER BITHORAX COMPLEX (BX-C)-RELATED   EC:2.1.1.62 validated
Qrob_P0605710.2 Quercus robur 100.0 egn (M=2) PTHR23359:SF78 - ADENYLATE KINASE (PTHR23359:SF78)   EC:2.7.4.3 validated
Qrob_P0619610.2 Quercus robur 100.0 egn (M=1) PF00098//PF03159 - Zinc knuckle // XRN 5'-3' exonuclease N-terminus     validated
Qrob_P0638240.2 Quercus robur 0.0 egn (M=2) 3.1.13.5 - Ribonuclease D.   EC:3.1.13.5 validated
Qrob_P0662820.2 Quercus robur 97.3 egn (M=2) K07447 - putative holliday junction resolvase [EC:3.1.-.-]     validated
Qrob_P0674130.2 Quercus robur 92.1 egn (M=1) K02335 - DNA polymerase I [EC:2.7.7.7]   EC:2.7.7.7 validated
Qrob_P0731580.2 Quercus robur 100.0 egn (M=1) K12951 - cation-transporting P-type ATPase D [EC:3.6.3.-]   EC:3.1.13.5 validated

3064 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0006139 GO:0000012
regulates GO:0006139 GO:0000018
regulates GO:0006139 GO:0000019
regulates GO:0006139 GO:0000083
regulates GO:0006139 GO:0000117
regulates GO:0006139 GO:0000122
negatively regulates GO:0006139 GO:0000122
is_a GO:0006139 GO:0000154
negatively regulates GO:0006139 GO:0000183
regulates GO:0006139 GO:0000183
is_a GO:0006139 GO:0000184
part of GO:0006139 GO:0000244
part of GO:0006139 GO:0000245
is_a GO:0006139 GO:0000288
part of GO:0006139 GO:0000289
is_a GO:0006139 GO:0000289
part of GO:0006139 GO:0000290
is_a GO:0006139 GO:0000290
is_a GO:0006139 GO:0000291
is_a GO:0006139 GO:0000292
is_a GO:0006139 GO:0000294
negatively regulates GO:0006139 GO:0000335
regulates GO:0006139 GO:0000335
regulates GO:0006139 GO:0000336
positively regulates GO:0006139 GO:0000336
regulates GO:0006139 GO:0000337
part of GO:0006139 GO:0000348
part of GO:0006139 GO:0000349
part of GO:0006139 GO:0000350
part of GO:0006139 GO:0000352

6 Synonyms

Name Type
nucleobase, nucleoside and nucleotide metabolic process synonym
cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism synonym
cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process synonym
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process synonym
nucleobase, nucleoside, nucleotide and nucleic acid metabolism synonym
GO:0055134 alt_id