3 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| GO:0006139 | nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. |
| GO:0019205 | nucleobase-containing compound kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate. |
10 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|mdm:103408751 | 1 | 138 | + | 138 | Gaps:18 | 48.19 | 249 | 57.50 | 7e-26 | adenylate kinase-like |
| blastp_kegg | lcl|pxb:103938235 | 1 | 138 | + | 138 | Gaps:18 | 48.19 | 249 | 57.50 | 1e-25 | probable adenylate kinase 7 mitochondrial |
| blastp_kegg | lcl|pop:POPTR_0015s10530g | 1 | 138 | + | 138 | Gaps:23 | 45.77 | 260 | 56.30 | 2e-25 | POPTRDRAFT_733573 hypothetical protein |
| blastp_kegg | lcl|cit:102630046 | 8 | 138 | + | 131 | Gaps:15 | 44.04 | 277 | 50.00 | 8e-22 | adenylate kinase-like |
| blastp_kegg | lcl|cic:CICLE_v10021683mg | 8 | 138 | + | 131 | Gaps:15 | 68.93 | 177 | 50.82 | 8e-21 | hypothetical protein |
| blastp_kegg | lcl|tcc:TCM_014607 | 21 | 138 | + | 118 | Gaps:20 | 38.66 | 269 | 51.92 | 3e-19 | P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 |
| blastp_kegg | lcl|vvi:100261051 | 35 | 138 | + | 104 | Gaps:14 | 30.10 | 299 | 55.56 | 2e-18 | probable adenylate kinase 1 chloroplastic-like |
| blastp_kegg | lcl|gmx:100784021 | 81 | 146 | + | 66 | none | 22.30 | 296 | 60.61 | 7e-18 | adenylate kinase-like |
| blastp_kegg | lcl|gmx:100784111 | 60 | 138 | + | 79 | Gaps:1 | 29.10 | 268 | 53.85 | 9e-18 | adenylate kinase 1 mitochondrial-like |
| blastp_kegg | lcl|ath:AT3G01820 | 37 | 138 | + | 102 | Gaps:15 | 33.08 | 263 | 52.87 | 1e-15 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
7 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| Phobius | 23 | 40 | 18 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
| Phobius | 12 | 22 | 11 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
| Phobius | 1 | 40 | 40 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
| PANTHER | 87 | 138 | 52 | PTHR23359:SF84 | none | none | none |
| Phobius | 41 | 235 | 195 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
| Phobius | 1 | 11 | 11 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
| PANTHER | 87 | 138 | 52 | PTHR23359 | "KEGG:00230+2.7.4.3","MetaCyc:PWY-7219","UniPathway:UPA00588";signature_desc=NUCLEOTIDE KINASE | none | IPR000850 |
5 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran2_2002_QTL13_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B1AG7_637 | s_1A3A1N_709 | 19,44 | 0 | 49,44 | lod | 3 | 5,6 |
| Bourran2_2002_QTL15_peak_Bud_burst_A4 | Qrob_Chr10 | 10 | v_7579_71 | s_1ATZMJ_189 | 23,94 | 0 | 43,64 | lod | 3,7 | 5,4 |
| Bourran2_2014_vSeqBC_3P | Qrob_Chr10 | 10 | s_1A6CK6_610 | v_7092_29 | 4,28 | 0 | 23,27 | lod | 2,8619 | 7 |
| Champenoux_2015_nPriLBD_3P | Qrob_Chr10 | 10 | v_15000_157 | v_15000_310 | 15,68 | 15,9 | 15,91 | lod | 2.4 | 5.5 |
| PM_1999_QTL16_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B6YNI_505 | s_1A1ZO_1322 | 7,48 | 0 | 31,48 | lod | 4 | 7,1 |
