7 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors. |
GO:0006221 | pyrimidine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. |
GO:0006139 | nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. |
GO:0019205 | nucleobase-containing compound kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate. |
GO:0004127 | cytidylate kinase activity | Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP. |
GO:0009041 | uridylate kinase activity | Catalysis of the reaction: ATP + (d)UMP = ADP + (d)UDP. |
42 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|cam:101502164 | 5 | 184 | + | 180 | none | 64.52 | 279 | 81.67 | 2e-105 | adenylate kinase-like |
blastp_kegg | lcl|gmx:100777369 | 5 | 181 | + | 177 | none | 76.62 | 231 | 78.53 | 3e-99 | UMP-CMP kinase-like |
blastp_kegg | lcl|mtr:MTR_5g068940 | 5 | 182 | + | 178 | none | 81.65 | 218 | 74.72 | 3e-99 | Adenylate kinase |
blastp_kegg | lcl|gmx:100806842 | 5 | 181 | + | 177 | none | 75.00 | 236 | 77.97 | 4e-99 | UMP-CMP kinase-like |
blastp_kegg | lcl|rcu:RCOM_1499990 | 5 | 182 | + | 178 | none | 59.73 | 298 | 78.65 | 2e-98 | uridylate kinase plant putative (EC:2.7.4.10) |
blastp_kegg | lcl|pop:POPTR_0015s14610g | 5 | 179 | + | 175 | none | 74.47 | 235 | 78.86 | 2e-98 | POPTRDRAFT_902025 adenylate kinase family protein |
blastp_kegg | lcl|pvu:PHAVU_011G004800g | 5 | 181 | + | 177 | none | 74.06 | 239 | 76.84 | 5e-98 | hypothetical protein |
blastp_kegg | lcl|vvi:100248550 | 5 | 180 | + | 176 | none | 73.95 | 238 | 76.14 | 4e-96 | adenylate kinase-like |
blastp_kegg | lcl|pmum:103336249 | 5 | 181 | + | 177 | none | 76.29 | 232 | 75.14 | 2e-95 | UMP-CMP kinase |
blastp_kegg | lcl|pper:PRUPE_ppa010904mg | 5 | 181 | + | 177 | none | 76.62 | 231 | 75.14 | 3e-95 | hypothetical protein |
blastp_pdb | 3adk_A | 5 | 172 | + | 168 | Gaps:5 | 87.69 | 195 | 45.03 | 2e-45 | mol:protein length:195 ADENYLATE KINASE |
blastp_pdb | 2bwj_F | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 2bwj_E | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 2bwj_D | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 2bwj_C | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 2bwj_B | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 2bwj_A | 5 | 172 | + | 168 | Gaps:5 | 85.93 | 199 | 46.20 | 3e-45 | mol:protein length:199 ADENYLATE KINASE 5 |
blastp_pdb | 1tev_A | 5 | 176 | + | 172 | Gaps:10 | 92.86 | 196 | 43.41 | 7e-45 | mol:protein length:196 UMP-CMP kinase |
blastp_pdb | 1ukz_A | 5 | 166 | + | 162 | Gaps:8 | 82.76 | 203 | 45.83 | 2e-44 | mol:protein length:203 URIDYLATE KINASE |
blastp_pdb | 1uky_A | 5 | 166 | + | 162 | Gaps:8 | 82.76 | 203 | 45.83 | 2e-44 | mol:protein length:203 URIDYLATE KINASE |
blastp_uniprot_sprot | sp|O24464|KCY_PRUAR | 5 | 181 | + | 177 | none | 76.62 | 231 | 75.71 | 2e-97 | UMP-CMP kinase OS Prunus armeniaca PE 2 SV 1 |
blastp_uniprot_sprot | sp|O04905|KCY_ARATH | 5 | 177 | + | 173 | none | 85.64 | 202 | 63.01 | 7e-73 | UMP-CMP kinase OS Arabidopsis thaliana GN PYR6 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q7ZX23|KCY_XENLA | 5 | 176 | + | 172 | Gaps:10 | 94.30 | 193 | 44.51 | 9e-48 | UMP-CMP kinase OS Xenopus laevis GN cmpk1 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q28H12|KCY_XENTR | 5 | 176 | + | 172 | Gaps:10 | 92.86 | 196 | 45.05 | 1e-47 | UMP-CMP kinase OS Xenopus tropicalis GN cmpk1 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q20140|KAD1_CAEEL | 5 | 172 | + | 168 | Gaps:6 | 81.90 | 210 | 50.00 | 2e-46 | Adenylate kinase isoenzyme 1 OS Caenorhabditis elegans GN F38B2.4 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q2KIW9|KCY_BOVIN | 5 | 176 | + | 172 | Gaps:10 | 92.86 | 196 | 43.96 | 3e-45 | UMP-CMP kinase OS Bos taurus GN CMPK1 PE 2 SV 2 |
blastp_uniprot_sprot | sp|P00570|KAD1_BOVIN | 5 | 180 | + | 176 | Gaps:5 | 92.27 | 194 | 44.13 | 4e-45 | Adenylate kinase isoenzyme 1 OS Bos taurus GN AK1 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q29561|KCY_PIG | 5 | 176 | + | 172 | Gaps:10 | 92.86 | 196 | 43.96 | 4e-45 | UMP-CMP kinase OS Sus scrofa GN CMPK1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P00571|KAD1_PIG | 5 | 172 | + | 168 | Gaps:5 | 88.14 | 194 | 45.03 | 6e-45 | Adenylate kinase isoenzyme 1 OS Sus scrofa GN AK1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P30085|KCY_HUMAN | 5 | 176 | + | 172 | Gaps:10 | 92.86 | 196 | 43.41 | 2e-44 | UMP-CMP kinase OS Homo sapiens GN CMPK1 PE 1 SV 3 |
13 Domain Motifs
10 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2004_QTL4_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,45 | 0 | 27,45 | lod | 4,5 | 10,6 |
Bourran_2000_2002_QTL7_Delta.F | Qrob_Chr09 | 9 | v_5944_442 | s_1BA1PC_866 | 23.51 | 10,96 | 35,74 | lod | 4.1466 | 0.041 |
Bourran2_2003_QTL11_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 4,16 | 48,16 | lod | 2,3 | 5,1 |
Bourran2_2003_QTL13_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1AP8MN_635 | s_1A3QQ_692 | 18,18 | 10,88 | 25,88 | lod | 3,4 | 7,2 |
Bourran2_2004_QTL12_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1BDO6G_250 | s_1A83AM_496 | 34,31 | 9,31 | 44,31 | lod | 3,6 | 7,6 |
Bourran2_2004_QTL14_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,83 | 10,33 | 22,33 | lod | 3,8 | 9 |
Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
Bourran2_2015_nSecLBD_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 35,81 | 34,88 | 37,45 | lod | 4.4 | 10.4 |
PM_1999_QTL15_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 9,16 | 47,16 | lod | 3,6 | 6,5 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf | Qrob_Chr09 | 9 | s_1C1GRV_1289 | s_1BXT7R_864 | 29.91 | 0 | 47,18 | lod | 7.0997 | 0.044 |