Protein : Qrob_P0674130.2 Q. robur
Protein Identifier  ? Qrob_P0674130.2 Organism . Name  Quercus robur
Score  92.1 Score Type  egn
Protein Description  (M=1) K02335 - DNA polymerase I [EC:2.7.7.7] Code Enzyme  EC:2.7.7.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1055  
Kegg Orthology  K02335
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO:0003887 DNA-directed DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0008408 3'-5' exonuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO:0006261 DNA-dependent DNA replication A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100257153 113 1051 + 939 Gaps:65 81.14 1034 70.32 0.0 uncharacterized LOC100257153
blastp_kegg lcl|rcu:RCOM_0586580 179 1051 + 873 Gaps:62 78.71 963 75.59 0.0 DNA polymerase I putative (EC:2.7.7.7)
blastp_kegg lcl|gmx:100797016 185 1051 + 867 Gaps:52 70.19 1077 76.98 0.0 uncharacterized LOC100797016
blastp_kegg lcl|gmx:100807239 184 1051 + 868 Gaps:51 70.20 1074 76.39 0.0 uncharacterized LOC100807239
blastp_kegg lcl|cam:101510274 57 1051 + 995 Gaps:67 81.23 1087 67.95 0.0 uncharacterized LOC101510274
blastp_kegg lcl|cam:101490997 185 1051 + 867 Gaps:54 69.32 1082 75.20 0.0 uncharacterized LOC101490997
blastp_kegg lcl|mtr:MTR_5g092100 184 1051 + 868 Gaps:51 69.93 1084 74.27 0.0 DNA polymerase
blastp_kegg lcl|pop:POPTR_0001s44720g 150 1051 + 902 Gaps:63 79.72 1006 72.69 0.0 hypothetical protein
blastp_kegg lcl|fve:101293674 195 1051 + 857 Gaps:55 69.68 1072 74.56 0.0 uncharacterized protein LOC101293674
blastp_kegg lcl|tcc:TCM_030964 108 1051 + 944 Gaps:69 71.79 1159 70.91 0.0 Polymerase gamma 2 isoform 1
blastp_pdb 5ktq_A 717 1051 + 335 Gaps:29 43.65 543 40.51 2e-31 mol:protein length:543 PROTEIN (DNA POLYMERASE I)
blastp_pdb 1ktq_A 717 1051 + 335 Gaps:29 43.65 543 40.51 2e-31 mol:protein length:543 DNA POLYMERASE I
blastp_pdb 2ktq_A 717 1051 + 335 Gaps:29 44.05 538 40.51 2e-31 mol:protein length:538 PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I)
blastp_pdb 2kzz_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 PROTEIN (DNA POLYMERASE I)
blastp_pdb 2kzm_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 PROTEIN (DNA POLYMERASE I)
blastp_pdb 2kfz_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 KLENOW FRAGMENT OF DNA POLYMERASE I
blastp_pdb 2kfn_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 KLENOW FRAGMENT OF DNA POLYMERASE I
blastp_pdb 1qsl_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 DNA POLYMERASE I
blastp_pdb 1ksp_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 PROTEIN (DNA POLYMERASE I-KLENOW FRAGMENT (E.
blastp_pdb 1krp_A 722 1051 + 330 Gaps:31 38.68 605 38.89 2e-31 mol:protein length:605 PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.
blastp_uniprot_sprot sp|Q9HT80|DPO1_PSEAE 716 1051 + 336 Gaps:37 27.05 913 41.30 1e-33 DNA polymerase I OS Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN polA PE 3 SV 1
blastp_uniprot_sprot sp|Q9S1G2|DPO1_RHILE 284 1051 + 768 Gaps:107 45.08 1016 37.12 8e-33 DNA polymerase I OS Rhizobium leguminosarum GN polA PE 3 SV 1
blastp_uniprot_sprot sp|O32801|DPO1_LACLM 715 1051 + 337 Gaps:30 27.14 877 38.66 2e-32 DNA polymerase I OS Lactococcus lactis subsp. cremoris (strain MG1363) GN polA PE 3 SV 2
blastp_uniprot_sprot sp|Q9CDS1|DPO1_LACLA 715 1051 + 337 Gaps:30 27.14 877 38.66 3e-32 DNA polymerase I OS Lactococcus lactis subsp. lactis (strain IL1403) GN polA PE 3 SV 1
blastp_uniprot_sprot sp|P59199|DPO1_STRPN 726 1051 + 326 Gaps:29 26.45 877 40.95 3e-32 DNA polymerase I OS Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN polA PE 3 SV 1
blastp_uniprot_sprot sp|P52026|DPO1_GEOSE 726 1051 + 326 Gaps:30 26.37 876 42.86 5e-32 DNA polymerase I OS Geobacillus stearothermophilus GN polA PE 1 SV 2
blastp_uniprot_sprot sp|P43741|DPO1_HAEIN 716 1038 + 323 Gaps:29 24.19 930 38.67 1e-31 DNA polymerase I OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN polA PE 3 SV 1
blastp_uniprot_sprot sp|P59200|DPO1_STRR6 726 1051 + 326 Gaps:29 26.45 877 40.52 2e-31 DNA polymerase I OS Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN polA PE 3 SV 1
blastp_uniprot_sprot sp|P00582|DPO1_ECOLI 722 1051 + 330 Gaps:31 25.22 928 38.89 2e-30 DNA polymerase I OS Escherichia coli (strain K12) GN polA PE 1 SV 1
blastp_uniprot_sprot sp|Q9F173|DPO1_SALTY 722 1051 + 330 Gaps:35 25.22 928 42.31 3e-30 DNA polymerase I OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN polA PE 3 SV 2

39 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 1023 1050 28 G3DSA:3.30.70.370 none none none
Gene3D 740 781 42 G3DSA:3.30.70.370 none none none
PANTHER 842 924 83 PTHR10133 none none none
PANTHER 654 681 28 PTHR10133 none none none
PANTHER 369 601 233 PTHR10133 none none none
SUPERFAMILY 949 1050 102 SSF56672 none none none
SMART 761 1049 289 SM00482 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA polymerase A domain IPR001098
PANTHER 996 1050 55 PTHR10133:SF25 none none none
PANTHER 842 924 83 PTHR10133:SF25 none none none
PANTHER 369 601 233 PTHR10133:SF25 none none none
PANTHER 719 816 98 PTHR10133:SF25 none none none
Pfam 271 430 160 PF01612 none 3'-5' exonuclease IPR002562
Pfam 950 1050 101 PF00476 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA polymerase family A IPR001098
Pfam 722 950 229 PF00476 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA polymerase family A IPR001098
PANTHER 175 338 164 PTHR10133:SF25 none none none
SUPERFAMILY 209 354 146 SSF53098 none none IPR012337
SUPERFAMILY 399 434 36 SSF53098 none none IPR012337
PRINTS 773 796 24 PR00868 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family A (pol I) signature IPR002298
PRINTS 803 816 14 PR00868 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family A (pol I) signature IPR002298
PRINTS 944 960 17 PR00868 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family A (pol I) signature IPR002298
PRINTS 728 750 23 PR00868 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family A (pol I) signature IPR002298
PRINTS 751 766 16 PR00868 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family A (pol I) signature IPR002298
PANTHER 719 816 98 PTHR10133 none none none
PANTHER 175 338 164 PTHR10133 none none none
PANTHER 654 681 28 PTHR10133:SF25 none none none
PANTHER 996 1050 55 PTHR10133 none none none
Coils 66 87 22 Coil none none none
Gene3D 572 599 28 G3DSA:1.20.1060.10 none none none
Gene3D 656 673 18 G3DSA:1.20.1060.10 none none none
Gene3D 729 739 11 G3DSA:1.20.1060.10 none none none

0 Localization

0 Qtllist

0 Targeting