GO Term : GO:0003677 DNA binding GO

Namespace  molecular_function Obsolete  false
description  Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

0 Cross References

1 Ontology

Name
GO

6 Parents

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:1901363 heterocyclic compound binding Interacting selectively and non-covalently with heterocyclic compound.
GO:0097159 organic cyclic compound binding Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure.

970 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0000650.2 Quercus robur 3.0 egn (M=6) K09285 - AP2-like factor, ANT lineage     validated
Qrob_P0002650.2 Quercus robur 100.0 egn (M=1) PF08755 - Hemimethylated DNA-binding protein YccV like     validated
Qrob_P0004150.2 Quercus robur 99.3 egn (M=8) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED (PTHR31241:SF2)     validated
Qrob_P0004450.2 Quercus robur 0.0 egn (M=2) PTHR11850//PTHR11850:SF62 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED     validated
Qrob_P0004470.2 Quercus robur 92.2 egn       validated
Qrob_P0005810.2 Quercus robur     (M=10) PTHR10641//PTHR10641:SF482 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Qrob_P0318410.1   manual_v1
Qrob_P0005940.2 Quercus robur 98.3 egn (M=4) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN (PTHR13935:SF46)     validated
Qrob_P0007800.2 Quercus robur 29.0 egn (M=3) K03120 - transcription initiation factor TFIID TATA-box-binding protein     validated
Qrob_P0007830.2 Quercus robur 15.0 egn (M=1) KOG0444//KOG0472//KOG0532//KOG0617//KOG0618//KOG3302//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // TATA-box binding protein (TBP) component of TFIID and TFIIIB [Transcription]. // Apoptotic ATPase [Signal transduction mechanisms].     validated
Qrob_P0007850.2 Quercus robur 0.0 egn (M=3) K03120 - transcription initiation factor TFIID TATA-box-binding protein     validated
Qrob_P0007880.2 Quercus robur 95.0 egn (M=3) K03120 - transcription initiation factor TFIID TATA-box-binding protein     validated
Qrob_P0007990.2 Quercus robur 93.2 egn (M=2) K00558 - DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]   EC:2.1.1.37 validated
Qrob_P0009940.2 Quercus robur 0.0 egn (M=4) PF03754 - Domain of unknown function (DUF313)     validated
Qrob_P0010150.2 Quercus robur     (M=3) K09420 - myb proto-oncogene protein Qrob_P0702820.1   manual_v1
Qrob_P0010380.2 Quercus robur 80.2 egn (M=3) K09420 - myb proto-oncogene protein     validated
Qrob_P0010480.2 Quercus robur 100.0 egn (M=10) PTHR31920:SF15 - B3 DOMAIN-CONTAINING PROTEIN REM20-RELATED (PTHR31920:SF15)     validated
Qrob_P0010490.2 Quercus robur 88.0 egn (M=84) PF02362 - B3 DNA binding domain     validated
Qrob_P0010500.2 Quercus robur 0.0 egn (M=84) PF02362 - B3 DNA binding domain     validated
Qrob_P0010510.2 Quercus robur 0.0 egn (M=10) PTHR31920:SF15 - B3 DOMAIN-CONTAINING PROTEIN REM20-RELATED (PTHR31920:SF15)     validated
Qrob_P0011720.2 Quercus robur     (M=9) PTHR10641//PTHR10641:SF495 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Qrob_P0050330.1   manual_v1
Qrob_P0013220.2 Quercus robur 0.0 egn (M=84) PF02362 - B3 DNA binding domain     validated
Qrob_P0013360.2 Quercus robur 100.0 egn (M=1) KOG0483//KOG0484//KOG0485//KOG0487//KOG0488//KOG0493//KOG0494//KOG0842//KOG0843//KOG4577 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor PHOX2/ARIX contains HOX domain [Transcription]. // Transcription factor NKX-5.1/HMX1 contains HOX domain [Transcription]. // Transcription factor Abd-B contains HOX domain [Transcription]. // Transcription factor BarH and related HOX domain proteins [General function prediction only]. // Transcription factor Engrailed contains HOX domain [General function prediction only]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor tinman/NKX2-3 contains HOX domain [Transcription]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. // Transcription factor LIM3 contains LIM and HOX domains [Transcription].     validated
Qrob_P0013800.2 Quercus robur 100.0 egn (M=1) K14516 - ethylene-responsive transcription factor 1     validated
Qrob_P0013970.2 Quercus robur     (M=108) PF00847 - AP2 domain Qrob_P0236220.1   manual_v1
Qrob_P0014280.2 Quercus robur 100.0 egn (M=1) K03014 - DNA-directed RNA polymerases I, II, and III subunit RPABC2   EC:2.7.7.6 validated
Qrob_P0014400.2 Quercus robur 100.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014410.2 Quercus robur 0.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014420.2 Quercus robur 100.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014460.2 Quercus robur 85.0 egn (M=108) PF00847 - AP2 domain     validated
Qrob_P0015490.2 Quercus robur 0.0 egn (M=10) PTHR31920:SF15 - B3 DOMAIN-CONTAINING PROTEIN REM20-RELATED (PTHR31920:SF15)     validated

148 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0003677 GO:0000182
is_a GO:0003677 GO:0000217
is_a GO:0003677 GO:0000332
is_a GO:0003677 GO:0000400
is_a GO:0003677 GO:0000401
is_a GO:0003677 GO:0000402
is_a GO:0003677 GO:0000403
is_a GO:0003677 GO:0000404
is_a GO:0003677 GO:0000405
is_a GO:0003677 GO:0000406
is_a GO:0003677 GO:0000497
is_a GO:0003677 GO:0000975
is_a GO:0003677 GO:0000976
is_a GO:0003677 GO:0000977
is_a GO:0003677 GO:0000978
is_a GO:0003677 GO:0000979
is_a GO:0003677 GO:0000980
is_a GO:0003677 GO:0000984
is_a GO:0003677 GO:0000985
is_a GO:0003677 GO:0000986
is_a GO:0003677 GO:0000987
is_a GO:0003677 GO:0000992
is_a GO:0003677 GO:0000997
is_a GO:0003677 GO:0001002
is_a GO:0003677 GO:0001003
is_a GO:0003677 GO:0001006
is_a GO:0003677 GO:0001012
is_a GO:0003677 GO:0001013
is_a GO:0003677 GO:0001016
is_a GO:0003677 GO:0001017

2 Synonyms

Name Type
microtubule/chromatin interaction synonym
plasmid binding synonym