Protein : Qrob_P0014400.2 Q. robur
Protein Identifier  ? Qrob_P0014400.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 212  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250412 26 211 + 186 Gaps:6 78.48 237 65.59 6e-65 ethylene-responsive transcription factor ERF025-like
blastp_kegg lcl|pop:POPTR_0015s13840g 29 210 + 182 Gaps:4 73.60 250 63.59 6e-62 POPTRDRAFT_835297 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1497440 26 210 + 185 Gaps:13 83.93 224 67.02 8e-58 Dehydration-responsive element-binding protein 1B putative
blastp_kegg lcl|pop:POPTR_0003s12120g 43 211 + 169 Gaps:6 96.02 176 62.72 1e-56 POPTRDRAFT_757449 AP2 domain-containing family protein
blastp_kegg lcl|pxb:103960523 1 210 + 210 Gaps:32 100.00 228 60.53 2e-56 ethylene-responsive transcription factor ERF027-like
blastp_kegg lcl|mdm:103439715 45 210 + 166 Gaps:7 74.12 228 68.64 1e-55 ethylene-responsive transcription factor ERF027-like
blastp_kegg lcl|tcc:TCM_015083 22 211 + 190 Gaps:8 68.04 291 60.61 3e-55 Integrase-type DNA-binding superfamily protein putative
blastp_kegg lcl|cic:CICLE_v10005869mg 44 211 + 168 Gaps:6 77.21 215 69.88 3e-54 hypothetical protein
blastp_kegg lcl|cit:102618475 44 211 + 168 Gaps:6 77.21 215 69.88 3e-54 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|mdm:103440186 46 210 + 165 Gaps:10 71.06 235 68.86 7e-54 ethylene-responsive transcription factor ERF027-like
blastp_pdb 3gcc_A 43 104 + 62 Gaps:4 88.57 70 53.23 4e-12 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 43 104 + 62 Gaps:4 88.57 70 53.23 4e-12 mol:protein length:70 ATERF1
blastp_pdb 1gcc_A 49 104 + 56 Gaps:2 92.06 63 53.45 6e-11 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_uniprot_sprot sp|Q9FJ90|ERF25_ARATH 42 210 + 169 Gaps:11 75.00 232 58.62 1e-50 Ethylene-responsive transcription factor ERF025 OS Arabidopsis thaliana GN ERF025 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAN9|ERF26_ARATH 45 210 + 166 Gaps:5 65.73 248 58.28 2e-40 Ethylene-responsive transcription factor ERF026 OS Arabidopsis thaliana GN ERF026 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ93|DRE1D_ARATH 16 210 + 195 Gaps:15 91.96 224 43.69 3e-39 Dehydration-responsive element-binding protein 1D OS Arabidopsis thaliana GN DREB1D PE 2 SV 1
blastp_uniprot_sprot sp|Q9SJR0|ERF24_ARATH 44 210 + 167 Gaps:11 94.57 184 46.55 2e-38 Ethylene-responsive transcription factor ERF024 OS Arabidopsis thaliana GN ERF024 PE 2 SV 1
blastp_uniprot_sprot sp|P93835|DRE1B_ARATH 45 210 + 166 Gaps:6 79.81 213 48.24 8e-38 Dehydration-responsive element-binding protein 1B OS Arabidopsis thaliana GN DREB1B PE 2 SV 2
blastp_uniprot_sprot sp|Q8S9Z5|DRE1F_ORYSJ 45 191 + 147 Gaps:4 68.95 219 48.34 8e-35 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. japonica GN DREB1F PE 3 SV 1
blastp_uniprot_sprot sp|A2WZI4|DRE1F_ORYSI 45 191 + 147 Gaps:4 68.95 219 48.34 8e-35 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. indica GN DREB1F PE 2 SV 1
blastp_uniprot_sprot sp|Q38Q39|ERF27_ARATH 48 210 + 163 Gaps:12 91.15 192 50.29 9e-35 Ethylene-responsive transcription factor ERF027 OS Arabidopsis thaliana GN ERF027 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYS6|DRE1C_ARATH 45 210 + 166 Gaps:16 78.70 216 44.71 2e-34 Dehydration-responsive element-binding protein 1C OS Arabidopsis thaliana GN DREB1C PE 2 SV 2
blastp_uniprot_sprot sp|Q9M0L0|DRE1A_ARATH 45 210 + 166 Gaps:8 78.70 216 45.29 6e-34 Dehydration-responsive element-binding protein 1A OS Arabidopsis thaliana GN DREB1A PE 1 SV 2
rpsblast_cdd gnl|CDD|197689 49 107 + 59 Gaps:1 93.75 64 58.33 6e-21 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 47 106 + 60 Gaps:1 100.00 61 60.66 6e-18 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 49 96 + 48 Gaps:5 96.23 53 52.94 1e-11 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 48 104 57 PS51032 none AP2/ERF domain profile. IPR001471
Gene3D 48 106 59 G3DSA:3.30.730.10 none none IPR001471
PANTHER 1 211 211 PTHR31985 none none none
SUPERFAMILY 47 105 59 SSF54171 none none IPR016177
PANTHER 1 211 211 PTHR31985:SF9 none none none
Pfam 49 96 48 PF00847 none AP2 domain IPR001471
SMART 48 110 63 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting