Protein : Qrob_P0013800.2 Q. robur
Protein Identifier  ? Qrob_P0013800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K14516 - ethylene-responsive transcription factor 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 229  
Kegg Orthology  K14516
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101312740 1 221 + 221 Gaps:23 99.59 243 62.40 2e-82 ethylene-responsive transcription factor 1B-like
blastp_kegg lcl|pper:PRUPE_ppa016384mg 1 221 + 221 Gaps:27 97.60 250 59.43 1e-79 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s04240g 32 225 + 194 Gaps:2 85.33 225 70.31 3e-79 POPTRDRAFT_571083 hypothetical protein
blastp_kegg lcl|cit:102610011 1 225 + 225 Gaps:22 100.00 239 64.44 9e-79 ethylene-responsive transcription factor 1B-like
blastp_kegg lcl|mdm:103451058 1 223 + 223 Gaps:29 100.00 248 61.29 1e-76 ethylene-responsive transcription factor 1B-like
blastp_kegg lcl|pxb:103954366 1 223 + 223 Gaps:29 100.00 248 60.89 1e-75 ethylene-responsive transcription factor 1B-like
blastp_kegg lcl|tcc:TCM_026234 1 225 + 225 Gaps:8 71.02 314 65.47 3e-75 Ethylene-responsive transcription factor
blastp_kegg lcl|tcc:TCM_026233 1 226 + 226 Gaps:6 99.56 225 66.07 2e-74 Ethylene-responsive transcription factor
blastp_kegg lcl|pop:POPTR_0019s03170g 1 224 + 224 Gaps:2 98.67 225 60.36 3e-74 POPTRDRAFT_665280 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0608740 1 225 + 225 Gaps:15 99.11 224 63.51 1e-72 Ethylene-responsive transcription factor 1B putative
blastp_pdb 1gcc_A 94 151 + 58 none 92.06 63 77.59 3e-27 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_pdb 3gcc_A 94 151 + 58 none 82.86 70 77.59 3e-26 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 94 151 + 58 none 82.86 70 77.59 3e-26 mol:protein length:70 ATERF1
blastp_uniprot_sprot sp|Q8LDC8|ERF92_ARATH 1 224 + 224 Gaps:15 98.62 218 52.56 9e-66 Ethylene-responsive transcription factor 1B OS Arabidopsis thaliana GN ERF1B PE 1 SV 2
blastp_uniprot_sprot sp|Q8VYM0|ERF93_ARATH 88 218 + 131 Gaps:29 65.84 243 53.12 3e-49 Ethylene-responsive transcription factor 15 OS Arabidopsis thaliana GN ERF15 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LND1|ERF94_ARATH 93 218 + 126 Gaps:34 65.57 244 51.88 2e-38 Ethylene-responsive transcription factor ERF094 OS Arabidopsis thaliana GN ERF094 PE 2 SV 1
blastp_uniprot_sprot sp|O04681|PTI5_SOLLC 39 159 + 121 Gaps:5 72.05 161 58.62 1e-36 Pathogenesis-related genes transcriptional activator PTI5 OS Solanum lycopersicum GN PTI5 PE 2 SV 1
blastp_uniprot_sprot sp|O80338|EF101_ARATH 39 154 + 116 Gaps:14 53.50 243 47.69 1e-31 Ethylene-responsive transcription factor 2 OS Arabidopsis thaliana GN ERF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L9K1|ERF99_ARATH 26 223 + 198 Gaps:27 87.17 226 40.10 2e-31 Ethylene-responsive transcription factor 13 OS Arabidopsis thaliana GN ERF13 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LW50|ERF2_NICSY 10 154 + 145 Gaps:26 65.40 237 41.29 2e-30 Ethylene-responsive transcription factor 2 OS Nicotiana sylvestris GN ERF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q84XB3|ERF1_SOLLC 4 154 + 151 Gaps:24 64.34 244 42.04 3e-30 Ethylene-responsive transcription factor 1 OS Solanum lycopersicum GN ERF1 PE 2 SV 1
blastp_uniprot_sprot sp|O80337|EF100_ARATH 39 154 + 116 Gaps:22 51.49 268 46.38 1e-29 Ethylene-responsive transcription factor 1A OS Arabidopsis thaliana GN ERF1A PE 1 SV 2
blastp_uniprot_sprot sp|Q40479|ERF2_TOBAC 26 202 + 177 Gaps:36 75.97 233 41.24 3e-29 Ethylene-responsive transcription factor 2 OS Nicotiana tabacum GN ERF2 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 93 152 + 60 Gaps:1 92.19 64 69.49 3e-25 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 94 152 + 59 Gaps:1 95.08 61 70.69 5e-21 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 94 143 + 50 Gaps:3 96.23 53 45.10 7e-10 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 61 225 165 PTHR31190:SF3 none none none
PRINTS 94 105 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 117 133 17 PR00367 none Ethylene responsive element binding protein signature IPR001471
SMART 93 157 65 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
Gene3D 93 152 60 G3DSA:3.30.730.10 none none IPR001471
PANTHER 61 225 165 PTHR31190 none none none
SUPERFAMILY 94 152 59 SSF54171 none none IPR016177
Pfam 94 143 50 PF00847 none AP2 domain IPR001471
ProSiteProfiles 93 151 59 PS51032 none AP2/ERF domain profile. IPR001471

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting