Protein : Qrob_P0010380.2 Q. robur
Protein Identifier  ? Qrob_P0010380.2 Organism . Name  Quercus robur
Score  80.2 Score Type  egn
Protein Description  (M=3) K09420 - myb proto-oncogene protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 198  
Kegg Orthology  K09420
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0802980 2 137 + 136 none 13.00 1046 84.56 6e-83 myb putative
blastp_kegg lcl|vvi:100261001 2 137 + 136 none 12.94 1051 85.29 6e-83 myb-related protein 3R-1-like
blastp_kegg lcl|vvi:100255911 2 137 + 136 none 12.95 1050 86.03 9e-83 myb-related protein 3R-1-like
blastp_kegg lcl|pop:POPTR_0006s25840g 2 137 + 136 none 13.24 1027 84.56 9e-83 POPTRDRAFT_561783 myb family transcription factor family protein
blastp_kegg lcl|cic:CICLE_v10007316mg 2 137 + 136 none 13.00 1046 84.56 1e-82 hypothetical protein
blastp_kegg lcl|cit:102622459 2 137 + 136 none 13.00 1046 84.56 2e-82 myb-related protein 3R-1-like
blastp_kegg lcl|pxb:103957479 2 137 + 136 none 13.08 1040 84.56 8e-82 myb-related protein 3R-1-like
blastp_kegg lcl|mdm:103424715 2 137 + 136 none 13.08 1040 84.56 9e-82 myb-related protein 3R-1-like
blastp_kegg lcl|mdm:103441179 2 137 + 136 none 13.33 1020 83.82 1e-81 myb-related protein 3R-1
blastp_kegg lcl|pmum:103320183 2 137 + 136 none 13.28 1024 83.82 2e-81 myb-related protein 3R-1-like
blastp_pdb 1h89_C 2 138 + 137 Gaps:2 95.60 159 67.11 5e-57 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h88_C 2 138 + 137 Gaps:2 95.60 159 67.11 5e-57 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h8a_C 2 138 + 137 Gaps:1 94.53 128 66.94 4e-49 mol:protein length:128 MYB TRANSFORMING PROTEIN
blastp_pdb 1a5j_A 2 137 + 136 Gaps:1 97.27 110 60.75 2e-38 mol:protein length:110 B-MYB
blastp_pdb 1gv2_A 2 137 + 136 Gaps:1 96.19 105 64.36 2e-36 mol:protein length:105 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1msf_C 2 137 + 136 Gaps:1 95.24 105 64.00 5e-36 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1mse_C 2 137 + 136 Gaps:1 95.24 105 64.00 5e-36 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1mbh_A 51 101 + 51 none 96.23 53 74.51 1e-21 mol:protein length:53 C-MYB
blastp_pdb 1mbg_A 51 101 + 51 none 96.23 53 74.51 1e-21 mol:protein length:53 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1gv5_A 2 101 + 100 none 100.00 52 76.92 4e-21 mol:protein length:52 MYB PROTO-ONCOGENE PROTEIN
blastp_uniprot_sprot sp|Q9S7G7|MB3R1_ARATH 2 137 + 136 none 17.53 776 80.15 5e-77 Myb-related protein 3R-1 OS Arabidopsis thaliana GN MYB3R-1 PE 2 SV 1
blastp_uniprot_sprot sp|P34127|MYBA_DICDI 4 137 + 134 none 10.89 1230 64.93 5e-58 Myb-like protein A OS Dictyostelium discoideum GN mybA PE 4 SV 2
blastp_uniprot_sprot sp|Q08759|MYB_XENLA 2 138 + 137 Gaps:2 24.04 624 68.67 1e-54 Transcriptional activator Myb OS Xenopus laevis GN myb PE 2 SV 1
blastp_uniprot_sprot sp|P10242|MYB_HUMAN 2 151 + 150 Gaps:16 33.59 640 55.81 3e-54 Transcriptional activator Myb OS Homo sapiens GN MYB PE 1 SV 2
blastp_uniprot_sprot sp|P46200|MYB_BOVIN 2 154 + 153 Gaps:22 33.59 640 55.81 3e-54 Transcriptional activator Myb OS Bos taurus GN MYB PE 2 SV 1
blastp_uniprot_sprot sp|P01103|MYB_CHICK 2 154 + 153 Gaps:17 29.02 641 60.75 4e-54 Transcriptional activator Myb OS Gallus gallus GN MYB PE 1 SV 1
blastp_uniprot_sprot sp|P06876|MYB_MOUSE 2 154 + 153 Gaps:22 30.97 636 58.88 4e-54 Transcriptional activator Myb OS Mus musculus GN Myb PE 1 SV 2
blastp_uniprot_sprot sp|P10243|MYBA_HUMAN 2 155 + 154 Gaps:10 21.54 752 59.88 1e-52 Myb-related protein A OS Homo sapiens GN MYBL1 PE 1 SV 2
blastp_uniprot_sprot sp|P51960|MYBA_MOUSE 2 155 + 154 Gaps:10 21.57 751 59.88 2e-52 Myb-related protein A OS Mus musculus GN Mybl1 PE 2 SV 2
blastp_uniprot_sprot sp|Q03237|MYBB_CHICK 2 148 + 147 Gaps:5 21.57 686 63.51 2e-52 Myb-related protein B OS Gallus gallus GN MYBL2 PE 1 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 104 160 57 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
SUPERFAMILY 50 137 88 SSF46689 none none IPR009057
PANTHER 2 137 136 PTHR10641:SF492 none none none
SMART 52 101 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 1 49 49 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 104 155 52 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
ProSiteProfiles 1 47 47 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
Gene3D 107 148 42 G3DSA:1.10.10.60 none none IPR009057
SUPERFAMILY 2 57 56 SSF46689 none none IPR009057
Pfam 2 47 46 PF00249 none Myb-like DNA-binding domain IPR001005
Pfam 56 114 59 PF13921 none Myb-like DNA-binding domain none
ProSiteProfiles 48 103 56 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
Gene3D 58 106 49 G3DSA:1.10.10.60 none none IPR009057
PANTHER 2 137 136 PTHR10641 none none none
Gene3D 3 57 55 G3DSA:1.10.10.60 none none IPR009057

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting