Protein : Qrob_P0000650.2 Q. robur
Protein Identifier  ? Qrob_P0000650.2 Organism . Name  Quercus robur
Score  3.0 Score Type  egn
Protein Description  (M=6) K09285 - AP2-like factor, ANT lineage Gene Prediction Quality  validated
Protein length 

Sequence

Length: 722  
Kegg Orthology  K09285
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_025114 1 721 + 721 Gaps:50 100.00 729 79.84 0.0 AP2 domain-containing transcription factor
blastp_kegg lcl|pop:POPTR_0008s07610g 1 721 + 721 Gaps:38 99.86 718 76.43 0.0 POPTRDRAFT_765647 hypothetical protein
blastp_kegg lcl|vvi:100241060 1 721 + 721 Gaps:49 100.00 730 78.49 0.0 AP2-like ethylene-responsive transcription factor BBM-like
blastp_kegg lcl|pop:POPTR_0010s18840g 1 720 + 720 Gaps:53 99.72 719 77.55 0.0 POPTRDRAFT_805401 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1077530 1 721 + 721 Gaps:56 100.00 729 75.86 0.0 Protein AINTEGUMENTA putative (EC:1.3.1.74)
blastp_kegg lcl|pda:103717533 1 720 + 720 Gaps:71 99.86 732 68.13 0.0 AP2-like ethylene-responsive transcription factor BBM
blastp_kegg lcl|pda:103708547 1 720 + 720 Gaps:69 99.86 730 67.22 0.0 AP2-like ethylene-responsive transcription factor AIL1
blastp_kegg lcl|pvu:PHAVU_008G052000g 1 720 + 720 Gaps:95 100.00 689 69.38 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10013851mg 5 721 + 717 Gaps:118 99.72 723 68.79 0.0 hypothetical protein
blastp_kegg lcl|cit:102620568 5 721 + 717 Gaps:118 99.72 723 68.79 0.0 AP2-like ethylene-responsive transcription factor BBM1-like
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 5 720 + 716 Gaps:207 99.31 579 56.70 4e-147 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L3U3|BBM1_BRANA 5 485 + 481 Gaps:108 67.88 579 66.67 1e-143 AP2-like ethylene-responsive transcription factor BBM1 OS Brassica napus GN BBM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ4|BBM_ARATH 1 721 + 721 Gaps:187 100.00 584 54.97 3e-142 AP2-like ethylene-responsive transcription factor BBM OS Arabidopsis thaliana GN BBM PE 2 SV 2
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 231 490 + 260 Gaps:17 44.54 568 77.47 2e-127 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 246 490 + 245 Gaps:15 42.86 574 77.64 7e-126 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 245 521 + 277 Gaps:16 50.36 558 70.82 7e-122 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 190 481 + 292 Gaps:28 69.88 415 63.45 1e-110 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q38914|ANT_ARATH 101 482 + 382 Gaps:59 67.21 555 54.69 3e-109 AP2-like ethylene-responsive transcription factor ANT OS Arabidopsis thaliana GN ANT PE 1 SV 2
blastp_uniprot_sprot sp|Q52QU2|AIL6_ARATH 290 484 + 195 Gaps:1 33.39 581 86.60 1e-105 AP2-like ethylene-responsive transcription factor AIL6 OS Arabidopsis thaliana GN AIL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q6J9N8|AIL7_ARATH 290 489 + 200 Gaps:4 40.56 498 79.21 2e-100 AP2-like ethylene-responsive transcription factor AIL7 OS Arabidopsis thaliana GN AIL7 PE 2 SV 2
rpsblast_cdd gnl|CDD|197689 302 465 + 164 Gaps:11 100.00 64 62.50 3e-22 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 301 461 + 161 Gaps:7 100.00 61 65.57 3e-17 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 301 451 + 151 Gaps:7 100.00 53 50.94 1e-08 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 302 371 70 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
SMART 401 465 65 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PRINTS 441 461 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 303 314 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
Pfam 400 451 52 PF00847 none AP2 domain IPR001471
Pfam 301 357 57 PF00847 none AP2 domain IPR001471
SUPERFAMILY 301 367 67 SSF54171 none none IPR016177
Gene3D 401 460 60 G3DSA:3.30.730.10 none none IPR001471
Gene3D 302 366 65 G3DSA:3.30.730.10 none none IPR001471
SUPERFAMILY 400 461 62 SSF54171 none none IPR016177
PANTHER 225 705 481 PTHR32467 none none IPR031112
PANTHER 95 166 72 PTHR32467 none none IPR031112
PANTHER 225 705 481 PTHR32467:SF5 none none none
ProSiteProfiles 302 365 64 PS51032 none AP2/ERF domain profile. IPR001471
ProSiteProfiles 401 459 59 PS51032 none AP2/ERF domain profile. IPR001471
PANTHER 95 166 72 PTHR32467:SF5 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting