Protein : Qrob_P0013360.2 Q. robur
Protein Identifier  ? Qrob_P0013360.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0483//KOG0484//KOG0485//KOG0487//KOG0488//KOG0493//KOG0494//KOG0842//KOG0843//KOG4577 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor PHOX2/ARIX contains HOX domain [Transcription]. // Transcription factor NKX-5.1/HMX1 contains HOX domain [Transcription]. // Transcription factor Abd-B contains HOX domain [Transcription]. // Transcription factor BarH and related HOX domain proteins [General function prediction only]. // Transcription factor Engrailed contains HOX domain [General function prediction only]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor tinman/NKX2-3 contains HOX domain [Transcription]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. // Transcription factor LIM3 contains LIM and HOX domains [Transcription]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 754  
Kegg Orthology  K09338
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103327957 1 753 + 753 Gaps:4 100.00 757 87.85 0.0 homeobox-leucine zipper protein GLABRA 2
blastp_kegg lcl|pper:PRUPE_ppa001840mg 1 753 + 753 Gaps:4 100.00 757 87.45 0.0 hypothetical protein
blastp_kegg lcl|pxb:103930444 1 753 + 753 Gaps:7 100.00 760 84.87 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|pxb:103944856 1 753 + 753 Gaps:9 100.00 762 85.43 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|mdm:103405451 1 753 + 753 Gaps:8 100.00 761 84.63 0.0 HD6 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|pxb:103930431 1 753 + 753 Gaps:12 100.00 765 83.92 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|vvi:100256623 1 753 + 753 Gaps:5 100.00 754 87.40 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|mdm:103443792 1 753 + 753 Gaps:9 100.00 762 86.09 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|fve:101315163 1 753 + 753 Gaps:11 100.00 764 85.08 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_kegg lcl|gmx:100809926 1 753 + 753 Gaps:12 100.00 751 83.75 0.0 homeobox-leucine zipper protein GLABRA 2-like
blastp_pdb 2jwt_A 107 155 + 49 none 80.33 61 44.90 3e-06 mol:protein length:61 Segmentation polarity homeobox protein engrai
blastp_pdb 1hdd_D 107 155 + 49 none 80.33 61 44.90 3e-06 mol:protein length:61 PROTEIN (ENGRAILED HOMEODOMAIN)
blastp_pdb 1hdd_C 107 155 + 49 none 80.33 61 44.90 3e-06 mol:protein length:61 PROTEIN (ENGRAILED HOMEODOMAIN)
blastp_pdb 1qry_A 90 158 + 69 Gaps:2 83.75 80 38.81 3e-06 mol:protein length:80 PROTEIN (HOMEOBOX VENTRAL NERVOUS SYSTEM DEFE
blastp_pdb 3hdd_B 107 155 + 49 none 81.67 60 44.90 3e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 3hdd_A 107 155 + 49 none 81.67 60 44.90 3e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 1vnd_A 89 158 + 70 Gaps:2 88.31 77 38.24 3e-06 mol:protein length:77 VND/NK-2 PROTEIN
blastp_pdb 1nk3_P 89 158 + 70 Gaps:2 88.31 77 38.24 3e-06 mol:protein length:77 HOMEOBOX PROTEIN VND
blastp_pdb 1nk2_P 89 158 + 70 Gaps:2 88.31 77 38.24 3e-06 mol:protein length:77 HOMEOBOX PROTEIN VND
blastp_pdb 3a01_F 96 153 + 58 none 86.57 67 34.48 7e-06 mol:protein length:67 Homeobox protein aristaless
blastp_uniprot_sprot sp|P46607|HGL2_ARATH 1 752 + 752 Gaps:32 99.60 747 67.47 0.0 Homeobox-leucine zipper protein GLABRA 2 OS Arabidopsis thaliana GN GL2 PE 2 SV 3
blastp_uniprot_sprot sp|Q5JMF3|ROC9_ORYSJ 5 751 + 747 Gaps:67 99.26 816 50.62 0.0 Homeobox-leucine zipper protein ROC9 OS Oryza sativa subsp. japonica GN ROC9 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WV12|ANL2_ARATH 14 751 + 738 Gaps:54 93.02 802 47.59 0.0 Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS Arabidopsis thaliana GN ANL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q93V99|PDF2_ARATH 58 753 + 696 Gaps:51 96.77 743 44.37 0.0 Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS Arabidopsis thaliana GN PDF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2E8|HDG1_ARATH 65 751 + 687 Gaps:88 90.22 808 45.95 0.0 Homeobox-leucine zipper protein HDG1 OS Arabidopsis thaliana GN HDG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWU4|ATML1_ARATH 63 751 + 689 Gaps:61 96.33 762 44.28 0.0 Homeobox-leucine zipper protein MERISTEM L1 OS Arabidopsis thaliana GN ATML1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6ZAR0|ROC1_ORYSJ 71 752 + 682 Gaps:58 91.33 784 45.53 0.0 Homeobox-leucine zipper protein ROC1 OS Oryza sativa subsp. japonica GN ROC1 PE 2 SV 1
blastp_uniprot_sprot sp|A2YR02|ROC7_ORYSI 91 753 + 663 Gaps:38 88.52 749 46.76 0.0 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. indica GN ROC7 PE 3 SV 1
blastp_uniprot_sprot sp|A3BPF2|ROC7_ORYSJ 91 753 + 663 Gaps:38 88.52 749 46.91 0.0 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. japonica GN ROC7 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J9X2|ROC2_ORYSJ 63 751 + 689 Gaps:55 91.07 784 44.96 0.0 Homeobox-leucine zipper protein ROC2 OS Oryza sativa subsp. japonica GN ROC2 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 315 487 173 G3DSA:3.30.530.20 none none IPR023393
Pfam 100 155 56 PF00046 none Homeobox domain IPR001356
ProSiteProfiles 97 157 61 PS50071 none 'Homeobox' domain profile. IPR001356
SUPERFAMILY 88 158 71 SSF46689 none none IPR009057
PANTHER 56 752 697 PTHR24325 none none none
Coils 156 184 29 Coil none none none
SUPERFAMILY 261 492 232 SSF55961 none none none
Pfam 269 492 224 PF01852 none START domain IPR002913
SMART 99 161 63 SM00389 none Homeodomain IPR001356
SMART 268 492 225 SM00234 none in StAR and phosphatidylcholine transfer protein IPR002913
Gene3D 86 151 66 G3DSA:1.10.10.60 none none IPR009057
PANTHER 56 752 697 PTHR24325:SF15 none none none
SUPERFAMILY 521 718 198 SSF55961 none none none
ProSiteProfiles 259 495 237 PS50848 none START domain profile. IPR002913
Coils 200 228 29 Coil none none none
ProSitePatterns 132 155 24 PS00027 none 'Homeobox' domain signature. IPR017970

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting