Protein : Qrob_P0004150.2 Q. robur
Protein Identifier  ? Qrob_P0004150.2 Organism . Name  Quercus robur
Score  99.3 Score Type  egn
Protein Description  (M=8) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED (PTHR31241:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 356  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0687530 7 342 + 336 Gaps:57 95.08 386 42.78 2e-76 Dehydration-responsive element-binding protein 2C putative
blastp_kegg lcl|pmum:103332837 4 353 + 350 Gaps:24 91.75 388 48.03 5e-76 dehydration-responsive element-binding protein 2C
blastp_kegg lcl|pvu:PHAVU_008G220400g 6 352 + 347 Gaps:25 94.21 380 48.04 2e-70 hypothetical protein
blastp_kegg lcl|cam:101507986 5 334 + 330 Gaps:39 89.36 404 44.04 2e-66 dehydration-responsive element-binding protein 2C-like
blastp_kegg lcl|aly:ARALYDRAFT_903325 6 355 + 350 Gaps:43 94.57 350 42.90 4e-63 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007606mg 4 353 + 350 Gaps:46 91.16 362 48.79 1e-60 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10023556mg 15 355 + 341 Gaps:55 94.61 334 44.30 3e-60 hypothetical protein
blastp_kegg lcl|mtr:MTR_5g083340 6 330 + 325 Gaps:46 89.19 407 43.80 2e-57 Ethylene-responsive element binding protein
blastp_kegg lcl|mdm:103417789 22 353 + 332 Gaps:30 87.44 398 45.11 3e-56 dehydration-responsive element-binding protein 2A-like
blastp_kegg lcl|pxb:103958655 22 334 + 313 Gaps:34 82.16 398 47.40 5e-56 dehydration-responsive element-binding protein 2A-like
blastp_pdb 3gcc_A 72 132 + 61 Gaps:1 88.57 70 64.52 8e-18 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 72 132 + 61 Gaps:1 88.57 70 64.52 8e-18 mol:protein length:70 ATERF1
blastp_pdb 1gcc_A 72 128 + 57 Gaps:1 92.06 63 65.52 8e-18 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_uniprot_sprot sp|Q8LFR2|DRE2C_ARATH 15 355 + 341 Gaps:41 95.01 341 40.74 2e-57 Dehydration-responsive element-binding protein 2C OS Arabidopsis thaliana GN DREB2C PE 2 SV 2
blastp_uniprot_sprot sp|O82132|DRE2A_ARATH 7 330 + 324 Gaps:54 94.93 335 48.11 1e-49 Dehydration-responsive element-binding protein 2A OS Arabidopsis thaliana GN DREB2A PE 1 SV 1
blastp_uniprot_sprot sp|Q0JQF7|DRE2A_ORYSJ 8 155 + 148 Gaps:8 53.28 274 57.53 2e-46 Dehydration-responsive element-binding protein 2A OS Oryza sativa subsp. japonica GN DREB2A PE 2 SV 1
blastp_uniprot_sprot sp|A2WL19|DRE2A_ORYSI 8 155 + 148 Gaps:8 53.28 274 57.53 2e-46 Dehydration-responsive element-binding protein 2A OS Oryza sativa subsp. indica GN DREB2A PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIZ0|DRE2H_ARATH 15 128 + 114 Gaps:9 77.07 157 62.81 2e-40 Putative dehydration-responsive element-binding protein 2H OS Arabidopsis thaliana GN DREB2H PE 5 SV 3
blastp_uniprot_sprot sp|O82133|DRE2B_ARATH 1 153 + 153 Gaps:7 48.48 330 56.25 5e-37 Dehydration-responsive element-binding protein 2B OS Arabidopsis thaliana GN DREB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q84ZA1|DRE2C_ORYSJ 21 126 + 106 Gaps:2 45.22 230 63.46 1e-36 Dehydration-responsive element-binding protein 2C OS Oryza sativa subsp. japonica GN DREB2C PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQZ2|DRE2D_ARATH 54 140 + 87 none 42.23 206 65.52 4e-33 Dehydration-responsive element-binding protein 2D OS Arabidopsis thaliana GN DREB2D PE 2 SV 1
blastp_uniprot_sprot sp|P61827|DRE2G_ARATH 54 127 + 74 none 24.10 307 72.97 4e-31 Dehydration-responsive element-binding protein 2G OS Arabidopsis thaliana GN DREB2G PE 2 SV 1
blastp_uniprot_sprot sp|O80917|DRE2E_ARATH 26 131 + 106 Gaps:13 44.67 244 61.47 9e-31 Dehydration-responsive element-binding protein 2E OS Arabidopsis thaliana GN DREB2E PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 71 133 + 63 none 98.44 64 69.84 2e-27 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 70 130 + 61 none 100.00 61 70.49 1e-23 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 70 120 + 51 Gaps:4 100.00 53 45.28 2e-10 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 10 261 252 PTHR31241 none none none
Gene3D 71 130 60 G3DSA:3.30.730.10 none none IPR001471
SMART 71 134 64 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PANTHER 10 261 252 PTHR31241:SF2 none none none
Pfam 70 120 51 PF00847 none AP2 domain IPR001471
SUPERFAMILY 71 130 60 SSF54171 none none IPR016177
PRINTS 72 83 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 94 110 17 PR00367 none Ethylene responsive element binding protein signature IPR001471
ProSiteProfiles 71 128 58 PS51032 none AP2/ERF domain profile. IPR001471

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting