Protein : Qrob_P0014410.2 Q. robur
Protein Identifier  ? Qrob_P0014410.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 219  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250412 45 218 + 174 Gaps:16 74.26 237 62.50 1e-56 ethylene-responsive transcription factor ERF025-like
blastp_kegg lcl|pop:POPTR_0003s12120g 51 218 + 168 Gaps:16 97.73 176 61.63 5e-55 POPTRDRAFT_757449 AP2 domain-containing family protein
blastp_kegg lcl|cic:CICLE_v10005869mg 56 218 + 163 Gaps:14 76.74 215 67.88 4e-52 hypothetical protein
blastp_kegg lcl|cit:102618475 56 218 + 163 Gaps:14 76.74 215 67.88 4e-52 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|tcc:TCM_015083 42 218 + 177 Gaps:17 64.60 291 59.04 1e-51 Integrase-type DNA-binding superfamily protein putative
blastp_kegg lcl|sot:102601547 39 217 + 179 Gaps:3 92.71 192 60.11 3e-51 ethylene-responsive transcription factor ERF025-like
blastp_kegg lcl|vvi:100247951 47 217 + 171 Gaps:13 95.70 186 60.67 4e-50 ethylene-responsive transcription factor ERF024-like
blastp_kegg lcl|rcu:RCOM_0384200 56 218 + 163 Gaps:10 90.86 186 59.17 4e-50 Dehydration-responsive element-binding protein 1B putative
blastp_kegg lcl|cam:101511542 59 218 + 160 Gaps:16 82.63 213 63.64 1e-49 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|sly:101268109 28 217 + 190 Gaps:28 96.63 178 60.47 1e-49 ethylene-responsive transcription factor ERF025-like
blastp_pdb 1gcc_A 60 115 + 56 Gaps:2 92.06 63 55.17 3e-11 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_pdb 3gcc_A 60 115 + 56 Gaps:2 82.86 70 55.17 1e-10 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 60 115 + 56 Gaps:2 82.86 70 55.17 1e-10 mol:protein length:70 ATERF1
blastp_uniprot_sprot sp|Q9SJR0|ERF24_ARATH 56 217 + 162 Gaps:13 94.02 184 53.18 2e-43 Ethylene-responsive transcription factor ERF024 OS Arabidopsis thaliana GN ERF024 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ90|ERF25_ARATH 56 217 + 162 Gaps:11 73.71 232 53.22 5e-42 Ethylene-responsive transcription factor ERF025 OS Arabidopsis thaliana GN ERF025 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S9Z5|DRE1F_ORYSJ 55 194 + 140 Gaps:16 69.41 219 50.66 2e-37 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. japonica GN DREB1F PE 3 SV 1
blastp_uniprot_sprot sp|A2WZI4|DRE1F_ORYSI 55 194 + 140 Gaps:16 69.41 219 50.66 2e-37 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. indica GN DREB1F PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ93|DRE1D_ARATH 55 217 + 163 Gaps:23 77.68 224 46.55 3e-36 Dehydration-responsive element-binding protein 1D OS Arabidopsis thaliana GN DREB1D PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAN9|ERF26_ARATH 56 217 + 162 Gaps:31 65.73 248 53.37 4e-36 Ethylene-responsive transcription factor ERF026 OS Arabidopsis thaliana GN ERF026 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYS6|DRE1C_ARATH 55 217 + 163 Gaps:16 79.17 216 46.20 5e-36 Dehydration-responsive element-binding protein 1C OS Arabidopsis thaliana GN DREB1C PE 2 SV 2
blastp_uniprot_sprot sp|P93835|DRE1B_ARATH 55 217 + 163 Gaps:18 80.28 213 49.71 5e-36 Dehydration-responsive element-binding protein 1B OS Arabidopsis thaliana GN DREB1B PE 2 SV 2
blastp_uniprot_sprot sp|Q9M0L0|DRE1A_ARATH 55 217 + 163 Gaps:14 79.17 216 43.86 3e-33 Dehydration-responsive element-binding protein 1A OS Arabidopsis thaliana GN DREB1A PE 1 SV 2
blastp_uniprot_sprot sp|Q38Q39|ERF27_ARATH 49 217 + 169 Gaps:20 96.35 192 44.86 5e-30 Ethylene-responsive transcription factor ERF027 OS Arabidopsis thaliana GN ERF027 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 59 117 + 59 Gaps:1 93.75 64 61.67 1e-21 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 58 117 + 60 Gaps:1 100.00 61 62.30 9e-19 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 58 107 + 50 Gaps:5 100.00 53 47.17 2e-09 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 59 121 63 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PANTHER 4 218 215 PTHR31985 none none none
Gene3D 59 116 58 G3DSA:3.30.730.10 none none IPR001471
SUPERFAMILY 59 117 59 SSF54171 none none IPR016177
ProSiteProfiles 59 115 57 PS51032 none AP2/ERF domain profile. IPR001471
Pfam 58 107 50 PF00847 none AP2 domain IPR001471
PANTHER 4 218 215 PTHR31985:SF9 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting