Protein : Qrob_P0121240.2 Q. robur
Protein Identifier  ? Qrob_P0121240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) 2.1.1.34 - tRNA (guanosine(18)-2'-O)-methyltransferase. Code Enzyme  EC:2.1.1.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 100  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO:0008173 RNA methyltransferase activity Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101229227 15 91 + 77 Gaps:8 46.70 182 77.65 2e-36 tRNA (guanosine(18)-2'-O)-methyltransferase-like
blastp_kegg lcl|pper:PRUPE_ppa008118mg 15 99 + 85 Gaps:8 27.03 344 70.97 2e-36 hypothetical protein
blastp_kegg lcl|cit:102622078 15 99 + 85 Gaps:8 26.05 357 72.04 3e-36 uncharacterized LOC102622078
blastp_kegg lcl|pmum:103330066 15 99 + 85 Gaps:8 25.62 363 69.89 4e-36 uncharacterized LOC103330066
blastp_kegg lcl|fve:101309862 13 99 + 87 Gaps:8 26.84 354 68.42 1e-35 tRNA (guanosine(18)-2'-O)-methyltransferase-like
blastp_kegg lcl|pop:POPTR_0996s00200g 15 99 + 85 Gaps:8 39.41 236 68.82 5e-35 hypothetical protein
blastp_kegg lcl|cmo:103486969 15 91 + 77 Gaps:8 23.04 369 77.65 6e-35 uncharacterized LOC103486969
blastp_kegg lcl|csv:101218911 15 91 + 77 Gaps:8 22.97 370 77.65 7e-35 tRNA (guanosine(18)-2'-O)-methyltransferase-like
blastp_kegg lcl|tcc:TCM_018687 13 99 + 87 Gaps:8 27.46 346 68.42 1e-34 TRNA/rRNA methyltransferase family protein
blastp_kegg lcl|pop:POPTR_0004s12070g 15 99 + 85 Gaps:8 27.27 341 69.89 1e-34 POPTRDRAFT_194933 hypothetical protein
blastp_pdb 1zjr_A 16 84 + 69 Gaps:13 38.86 211 36.59 5e-07 mol:protein length:211 tRNA (Guanosine-2'-O-)-methyltransferase
blastp_pdb 1v2x_A 17 54 + 38 none 19.59 194 55.26 4e-06 mol:protein length:194 tRNA (Gm18) methyltransferase
rpsblast_cdd gnl|CDD|182949 17 71 + 55 Gaps:11 28.82 229 45.45 3e-11 PRK11081 PRK11081 tRNA guanosine-2'-O-methyltransferase Provisional.
rpsblast_cdd gnl|CDD|201328 15 52 + 38 none 26.76 142 50.00 7e-11 pfam00588 SpoU_methylase SpoU rRNA Methylase family. This family of proteins probably use S-AdoMet.
rpsblast_cdd gnl|CDD|30912 17 54 + 38 none 14.62 260 55.26 2e-10 COG0566 SpoU rRNA methylases [Translation ribosomal structure and biogenesis].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 16 54 39 G3DSA:3.40.1280.10 none none IPR029026
SUPERFAMILY 15 54 40 SSF75217 none none IPR029028
PANTHER 15 82 68 PTHR12029:SF45 none none none
Pfam 16 52 37 PF00588 none SpoU rRNA Methylase family IPR001537
PANTHER 15 82 68 PTHR12029 none none none

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting