26 Parents
| Identifier | Name | Description |
|---|---|---|
| GO:0006396 | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
| GO:0008152 | metabolic process | The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
| GO:0016070 | RNA metabolic process | The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
| GO:0006364 | rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
| GO:0044237 | cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
| GO:0042254 | ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
| GO:0006139 | nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. |
| GO:0071704 | organic substance metabolic process | The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon. |
| GO:0006807 | nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium. |
| GO:0006725 | cellular aromatic compound metabolic process | The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells. |
| GO:0044238 | primary metabolic process | The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. |
| GO:0009987 | cellular process | Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. |
| GO:0071840 | cellular component organization or biogenesis | A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component. |
| GO:0008150 | biological_process | Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end. |
| GO:0044260 | cellular macromolecule metabolic process | The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells. |
| GO:0090304 | nucleic acid metabolic process | Any cellular metabolic process involving nucleic acids. |
| GO:0043170 | macromolecule metabolic process | The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. |
| GO:0046483 | heterocycle metabolic process | The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). |
| GO:0034641 | cellular nitrogen compound metabolic process | The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells. |
| GO:1901360 | organic cyclic compound metabolic process | The chemical reactions and pathways involving organic cyclic compound. |
| GO:0044085 | cellular component biogenesis | A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. |
| GO:0022613 | ribonucleoprotein complex biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a complex containing RNA and proteins. Includes the biosynthesis of the constituent RNA and protein molecules, and those macromolecular modifications that are involved in synthesis or assembly of the ribonucleoprotein complex. |
| GO:0010467 | gene expression | The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. |
| GO:0034470 | ncRNA processing | Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules. |
| GO:0034660 | ncRNA metabolic process | The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs). |
| GO:0016072 | rRNA metabolic process | The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes. |
25 Protein
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0018810.2 | Quercus robur | 0.0 | egn | (M=1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase. | EC:2.1.1.177 | validated | |
| Qrob_P0026500.2 | Quercus robur | 99.0 | egn | (M=1) K14554 - U3 small nucleolar RNA-associated protein 21 | validated | ||
| Qrob_P0123750.2 | Quercus robur | 98.0 | egn | (M=2) K14555 - U3 small nucleolar RNA-associated protein 13 | validated | ||
| Qrob_P0139910.2 | Quercus robur | 100.0 | egn | (M=1) 2.1.1.182 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase. | EC:2.1.1.182 | validated | |
| Qrob_P0152560.2 | Quercus robur | 22.2 | egn | (M=6) K14563 - rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] | validated | ||
| Qrob_P0152600.2 | Quercus robur | 81.2 | egn | (M=6) K14563 - rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] | EC:3.6.4.13 | validated | |
| Qrob_P0290660.2 | Quercus robur | 6.3 | egn | (M=1) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0296//KOG0310//KOG0319//KOG2495//KOG4378 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. // NADH-dehydrogenase (ubiquinone) [Energy production and conversion]. // Nuclear protein COP1 [Signal transduction mechanisms]. | validated | ||
| Qrob_P0290760.2 | Quercus robur | 0.0 | egn | (M=2) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0276//KOG0284//KOG0305//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Vesicle coat complex COPI beta' subunit [Intracellular trafficking secretion and vesicular transport]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Anaphase promoting complex Cdc20 Cdh1 and Ama1 subunits [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0290810.2 | Quercus robur | 0.0 | egn | (M=6) K14549 - U3 small nucleolar RNA-associated protein 15 | validated | ||
| Qrob_P0290830.2 | Quercus robur | 0.0 | egn | (M=1) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0282//KOG0284//KOG0285//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // mRNA splicing factor [Function unknown]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Pleiotropic regulator 1 [RNA processing and modification]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0291830.2 | Quercus robur | 100.0 | egn | (M=1) K02834 - ribosome-binding factor A | validated | ||
| Qrob_P0297860.2 | Quercus robur | 100.0 | egn | (M=2) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0276//KOG0284//KOG0305//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Vesicle coat complex COPI beta' subunit [Intracellular trafficking secretion and vesicular transport]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Anaphase promoting complex Cdc20 Cdh1 and Ama1 subunits [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0299770.2 | Quercus robur | 98.0 | egn | (M=2) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase. | EC:2.1.1.183 | validated | |
| Qrob_P0328240.2 | Quercus robur | 80.3 | egn | (M=2) KOG0116//KOG0921//KOG1596 - RasGAP SH3 binding protein rasputin contains NTF2 and RRM domains [Signal transduction mechanisms]. // Dosage compensation complex subunit MLE [Transcription]. // Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification]. | EC:3.6.4.13 | validated | |
| Qrob_P0330240.2 | Quercus robur | 100.0 | egn | (M=1) PF01782 - RimM N-terminal domain | validated | ||
| Qrob_P0330380.2 | Quercus robur | 0.0 | egn | (M=3) K14857 - AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] | EC:2.1.1.167 | validated | |
| Qrob_P0347500.2 | Quercus robur | 100.0 | egn | (M=1) K14849 - ribosomal RNA-processing protein 1 | validated | ||
| Qrob_P0386940.2 | Quercus robur | 100.0 | egn | (M=2) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase. | EC:2.1.1.183 | validated | |
| Qrob_P0446210.2 | Quercus robur | 87.3 | egn | (M=2) KOG0116//KOG0921//KOG1596 - RasGAP SH3 binding protein rasputin contains NTF2 and RRM domains [Signal transduction mechanisms]. // Dosage compensation complex subunit MLE [Transcription]. // Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification]. | EC:3.6.4.13 | validated | |
| Qrob_P0446930.2 | Quercus robur | 94.2 | egn | (M=1) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase. | EC:2.1.1.178 | validated | |
| Qrob_P0559160.2 | Quercus robur | 100.0 | egn | (M=1) K14567 - U3 small nucleolar RNA-associated protein 14 | validated | ||
| Qrob_P0573510.2 | Quercus robur | 7.1 | egn | (M=1) 2.1.1.170 - 16S rRNA (guanine(527)-N(7))-methyltransferase. | EC:2.1.1.170 | validated | |
| Qrob_P0584600.2 | Quercus robur | 93.2 | egn | (M=1) KOG0921//KOG1596//KOG3973 - Dosage compensation complex subunit MLE [Transcription]. // Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification]. // Uncharacterized conserved glycine-rich protein [Function unknown]. | validated | ||
| Qrob_P0584610.2 | Quercus robur | 100.0 | egn | (M=6) K14563 - rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] | validated | ||
| Qrob_P0628690.2 | Quercus robur | 100.0 | egn | (M=1) K14824 - ribosome biogenesis protein ERB1 | validated |
102 Relations
| Relationship |
Parent Term . Identifier |
Child Term . Identifier |
|---|---|---|
| is_a | GO:0006364 | GO:0000154 |
| part of | GO:0006364 | GO:0000447 |
| part of | GO:0006364 | GO:0000448 |
| part of | GO:0006364 | GO:0000449 |
| part of | GO:0006364 | GO:0000450 |
| is_a | GO:0006364 | GO:0000451 |
| is_a | GO:0006364 | GO:0000452 |
| is_a | GO:0006364 | GO:0000453 |
| is_a | GO:0006364 | GO:0000454 |
| is_a | GO:0006364 | GO:0000455 |
| part of | GO:0006364 | GO:0000456 |
| is_a | GO:0006364 | GO:0000456 |
| part of | GO:0006364 | GO:0000457 |
| part of | GO:0006364 | GO:0000458 |
| part of | GO:0006364 | GO:0000459 |
| is_a | GO:0006364 | GO:0000460 |
| part of | GO:0006364 | GO:0000461 |
| is_a | GO:0006364 | GO:0000461 |
| is_a | GO:0006364 | GO:0000462 |
| is_a | GO:0006364 | GO:0000463 |
| part of | GO:0006364 | GO:0000464 |
| part of | GO:0006364 | GO:0000465 |
| is_a | GO:0006364 | GO:0000465 |
| is_a | GO:0006364 | GO:0000466 |
| part of | GO:0006364 | GO:0000467 |
| is_a | GO:0006364 | GO:0000467 |
| part of | GO:0006364 | GO:0000468 |
| is_a | GO:0006364 | GO:0000468 |
| part of | GO:0006364 | GO:0000469 |
| is_a | GO:0006364 | GO:0000470 |
