Protein : Qrob_P0584610.2 Q. robur
Protein Identifier  ? Qrob_P0584610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K14563 - rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 132  
Kegg Orthology  K14563
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015226 45 128 + 84 none 63.16 133 84.52 4e-44 RRNA 2'-O-methyltransferase fibrillarin 2
blastp_kegg lcl|gmx:100788688 48 131 + 84 none 27.54 305 84.52 8e-43 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|osa:4331181 49 128 + 80 none 91.95 87 85.00 9e-43 Os02g0821800
blastp_kegg lcl|pvu:PHAVU_001G057200g 48 131 + 84 none 26.17 321 84.52 9e-43 hypothetical protein
blastp_kegg lcl|gmx:100814656 48 131 + 84 none 26.67 315 84.52 1e-42 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|cam:101508977 48 128 + 81 none 26.30 308 87.65 2e-42 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|cit:102629115 48 128 + 81 none 26.56 305 87.65 2e-42 probable mediator of RNA polymerase II transcription subunit 36b-like
blastp_kegg lcl|gmx:100797625 48 131 + 84 none 27.45 306 83.33 4e-42 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|bdi:100840221 48 130 + 83 none 27.48 302 85.54 5e-42 rRNA 2'-O-methyltransferase fibrillarin 1-like
blastp_kegg lcl|gmx:100789137 48 131 + 84 none 26.84 313 83.33 5e-42 mediator of RNA polymerase II transcription subunit 36a-like
blastp_pdb 2ipx_A 48 122 + 75 none 32.19 233 70.67 4e-30 mol:protein length:233 rRNA 2'-O-methyltransferase fibrillarin
blastp_pdb 3pla_M 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3pla_F 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3pla_E 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3id6_C 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3id5_F 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3id5_B 48 122 + 75 none 32.33 232 36.00 3e-12 mol:protein length:232 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 1g8s_A 48 119 + 72 none 31.30 230 41.67 3e-12 mol:protein length:230 FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
blastp_pdb 1fbn_A 48 119 + 72 none 31.30 230 41.67 3e-12 mol:protein length:230 MJ FIBRILLARIN HOMOLOGUE
blastp_pdb 1pry_A 48 118 + 71 Gaps:1 30.84 227 44.29 4e-12 mol:protein length:227 Fibrillarin-like pre-rRNA processing protein
blastp_uniprot_sprot sp|Q94AH9|MD36A_ARATH 48 128 + 81 none 25.31 320 83.95 1e-41 Mediator of RNA polymerase II transcription subunit 36a OS Arabidopsis thaliana GN MED36A PE 1 SV 2
blastp_uniprot_sprot sp|Q9FEF8|MD36B_ARATH 48 131 + 84 none 27.27 308 82.14 4e-41 Probable mediator of RNA polymerase II transcription subunit 36b OS Arabidopsis thaliana GN MED36B PE 1 SV 1
blastp_uniprot_sprot sp|Q80WS3|FBLL1_MOUSE 48 128 + 81 none 25.80 314 70.37 2e-31 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS Mus musculus GN Fbll1 PE 2 SV 1
blastp_uniprot_sprot sp|P22509|FBRL_RAT 48 128 + 81 none 24.77 327 69.14 1e-30 rRNA 2'-O-methyltransferase fibrillarin OS Rattus norvegicus GN Fbl PE 1 SV 2
blastp_uniprot_sprot sp|P35550|FBRL_MOUSE 48 128 + 81 none 24.77 327 69.14 3e-30 rRNA 2'-O-methyltransferase fibrillarin OS Mus musculus GN Fbl PE 2 SV 2
blastp_uniprot_sprot sp|P22087|FBRL_HUMAN 48 128 + 81 none 25.23 321 69.14 3e-30 rRNA 2'-O-methyltransferase fibrillarin OS Homo sapiens GN FBL PE 1 SV 2
blastp_uniprot_sprot sp|A6NHQ2|FBLL1_HUMAN 48 127 + 80 Gaps:1 24.32 333 69.14 6e-30 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS Homo sapiens GN FBLL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q22053|FBRL_CAEEL 48 128 + 81 Gaps:1 22.73 352 71.25 9e-30 rRNA 2'-O-methyltransferase fibrillarin OS Caenorhabditis elegans GN fib-1 PE 3 SV 1
blastp_uniprot_sprot sp|P22232|FBRL_XENLA 48 128 + 81 none 25.08 323 67.90 2e-29 rRNA 2'-O-methyltransferase fibrillarin OS Xenopus laevis GN fbl PE 2 SV 1
blastp_uniprot_sprot sp|Q8I1F4|FBRL_DROER 48 126 + 79 none 22.90 345 68.35 4e-29 rRNA 2'-O-methyltransferase fibrillarin OS Drosophila erecta GN Fib PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 45 119 75 SSF53335 none none IPR029063
Pfam 48 122 75 PF01269 none Fibrillarin IPR000692
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 20 45 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 48 77 30 PR00052 none Fibrillarin signature IPR000692
PRINTS 100 121 22 PR00052 none Fibrillarin signature IPR000692
Phobius 46 131 86 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 51 131 81 PTHR10335 none none none
Gene3D 50 121 72 G3DSA:3.40.50.150 none none IPR029063

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting