Protein : Qrob_P0584600.2 Q. robur
Protein Identifier  ? Qrob_P0584600.2 Organism . Name  Quercus robur
Score  93.2 Score Type  egn
Protein Description  (M=1) KOG0921//KOG1596//KOG3973 - Dosage compensation complex subunit MLE [Transcription]. // Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification]. // Uncharacterized conserved glycine-rich protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 244  
Kegg Orthology  K14563
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10032221mg 65 240 + 176 Gaps:2 76.99 226 90.23 4e-110 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa010543mg 65 228 + 164 none 66.94 245 93.90 5e-110 hypothetical protein
blastp_kegg lcl|mtr:MTR_053s1051 65 228 + 164 none 52.40 313 92.07 1e-107 Fibrillarin
blastp_kegg lcl|mtr:MTR_1g114000 65 228 + 164 none 52.40 313 92.07 1e-107 Fibrillarin
blastp_kegg lcl|brp:103863368 61 228 + 168 none 54.19 310 89.88 3e-107 mediator of RNA polymerase II transcription subunit 36a
blastp_kegg lcl|pxb:103958230 65 228 + 164 none 53.25 308 93.29 4e-107 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|ath:AT5G52470 65 228 + 164 none 60.07 273 92.68 5e-107 FIB1 probable mediator of RNA polymerase II transcription subunit 36b
blastp_kegg lcl|aly:ARALYDRAFT_492264 65 228 + 164 none 51.74 317 93.29 5e-107 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10025746mg 65 228 + 164 none 51.25 320 92.07 9e-107 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_001G057200g 65 228 + 164 none 51.09 321 91.46 1e-106 hypothetical protein
blastp_pdb 2ipx_A 68 228 + 161 Gaps:1 68.67 233 80.62 2e-92 mol:protein length:233 rRNA 2'-O-methyltransferase fibrillarin
blastp_pdb 1pry_A 71 228 + 158 Gaps:7 68.28 227 56.13 5e-46 mol:protein length:227 Fibrillarin-like pre-rRNA processing protein
blastp_pdb 3nvm_B 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nvk_J 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nvk_I 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nmu_J 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nmu_F 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 2nnw_D 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 2nnw_B 71 228 + 158 Gaps:7 66.24 234 56.13 5e-46 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 1g8a_A 71 228 + 158 Gaps:7 68.28 227 54.84 2e-44 mol:protein length:227 FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
blastp_uniprot_sprot sp|Q9FEF8|MD36B_ARATH 65 228 + 164 none 53.25 308 92.68 8e-109 Probable mediator of RNA polymerase II transcription subunit 36b OS Arabidopsis thaliana GN MED36B PE 1 SV 1
blastp_uniprot_sprot sp|Q94AH9|MD36A_ARATH 65 228 + 164 none 51.25 320 92.07 4e-108 Mediator of RNA polymerase II transcription subunit 36a OS Arabidopsis thaliana GN MED36A PE 1 SV 2
blastp_uniprot_sprot sp|P35551|FBRL_SCHPO 69 228 + 160 none 52.46 305 81.25 1e-93 rRNA 2'-O-methyltransferase fibrillarin OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN fib1 PE 1 SV 1
blastp_uniprot_sprot sp|P35550|FBRL_MOUSE 66 228 + 163 Gaps:1 49.54 327 79.63 6e-91 rRNA 2'-O-methyltransferase fibrillarin OS Mus musculus GN Fbl PE 2 SV 2
blastp_uniprot_sprot sp|P22087|FBRL_HUMAN 66 228 + 163 Gaps:1 50.47 321 79.63 7e-91 rRNA 2'-O-methyltransferase fibrillarin OS Homo sapiens GN FBL PE 1 SV 2
blastp_uniprot_sprot sp|P22509|FBRL_RAT 66 228 + 163 Gaps:1 49.54 327 79.63 8e-91 rRNA 2'-O-methyltransferase fibrillarin OS Rattus norvegicus GN Fbl PE 1 SV 2
blastp_uniprot_sprot sp|P22232|FBRL_XENLA 70 228 + 159 Gaps:3 48.92 323 81.65 6e-89 rRNA 2'-O-methyltransferase fibrillarin OS Xenopus laevis GN fbl PE 2 SV 1
blastp_uniprot_sprot sp|Q8I1F4|FBRL_DROER 71 228 + 158 Gaps:1 45.51 345 78.34 3e-87 rRNA 2'-O-methyltransferase fibrillarin OS Drosophila erecta GN Fib PE 3 SV 1
blastp_uniprot_sprot sp|Q9FHB3|FBRL3_ARATH 58 228 + 171 none 58.56 292 72.51 8e-87 Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS Arabidopsis thaliana GN FIB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9W1V3|FBRL_DROME 71 228 + 158 Gaps:1 45.64 344 77.71 2e-86 rRNA 2'-O-methyltransferase fibrillarin OS Drosophila melanogaster GN Fib PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 228 225 PTHR10335 none none none
SUPERFAMILY 71 234 164 SSF53335 none none IPR029063
Gene3D 124 236 113 G3DSA:3.40.50.150 none none IPR029063
Pfam 73 229 157 PF01269 none Fibrillarin IPR000692
PRINTS 91 110 20 PR00052 none Fibrillarin signature IPR000692
PRINTS 119 138 20 PR00052 none Fibrillarin signature IPR000692
PRINTS 196 225 30 PR00052 none Fibrillarin signature IPR000692
PRINTS 171 188 18 PR00052 none Fibrillarin signature IPR000692
PRINTS 146 167 22 PR00052 none Fibrillarin signature IPR000692
Gene3D 68 123 56 G3DSA:3.30.200.20 none none none
ProSitePatterns 171 185 15 PS00566 none Fibrillarin signature. IPR020813

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting