Protein : Qrob_P0330380.2 Q. robur
Protein Identifier  ? Qrob_P0330380.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K14857 - AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] Code Enzyme  EC:2.1.1.167
Gene Prediction Quality  validated Protein length 

Sequence

Length: 199  
Kegg Orthology  K14857
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0001510 RNA methylation Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
GO:0008649 rRNA methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.
GO:0031167 rRNA methylation The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v100278442m 1 173 + 173 Gaps:2 27.09 646 81.14 5e-86 hypothetical protein
blastp_kegg lcl|vvi:100255646 1 198 + 198 Gaps:12 23.99 842 76.24 5e-85 adoMet-dependent rRNA methyltransferase spb1-like
blastp_kegg lcl|cit:102627301 1 173 + 173 Gaps:2 21.03 832 81.14 4e-84 putative rRNA methyltransferase-like
blastp_kegg lcl|cmo:103499682 1 190 + 190 Gaps:15 23.83 852 70.94 8e-82 adoMet-dependent rRNA methyltransferase spb1
blastp_kegg lcl|csv:101227283 1 192 + 192 Gaps:6 30.57 615 76.06 2e-81 adoMet-dependent rRNA methyltransferase spb1-like
blastp_kegg lcl|mdm:103440389 1 193 + 193 Gaps:8 23.34 861 74.13 3e-81 putative rRNA methyltransferase
blastp_kegg lcl|pxb:103967111 1 193 + 193 Gaps:8 23.26 864 74.13 4e-81 putative rRNA methyltransferase
blastp_kegg lcl|pxb:103937441 1 193 + 193 Gaps:18 23.60 860 73.89 8e-81 putative rRNA methyltransferase
blastp_kegg lcl|pxb:103934638 1 193 + 193 Gaps:18 23.52 863 73.89 9e-81 putative rRNA methyltransferase
blastp_kegg lcl|pmum:103335669 1 195 + 195 Gaps:5 23.11 848 72.96 6e-80 putative rRNA methyltransferase
blastp_uniprot_sprot sp|Q54NX0|SPB1_DICDI 1 151 + 151 Gaps:7 18.49 833 51.30 3e-37 Putative rRNA methyltransferase OS Dictyostelium discoideum GN fsjC PE 3 SV 1
blastp_uniprot_sprot sp|Q5RAS1|SPB1_PONAB 4 150 + 147 Gaps:12 18.67 841 49.04 9e-28 pre-rRNA processing protein FTSJ3 OS Pongo abelii GN FTSJ3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8IY81|SPB1_HUMAN 4 150 + 147 Gaps:12 18.54 847 49.04 2e-27 pre-rRNA processing protein FTSJ3 OS Homo sapiens GN FTSJ3 PE 1 SV 2
blastp_uniprot_sprot sp|Q5BH88|SPB1_EMENI 4 151 + 148 Gaps:9 19.48 806 42.68 3e-27 AdoMet-dependent rRNA methyltransferase spb1 OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN spb1 PE 3 SV 1
blastp_uniprot_sprot sp|Q4P6G5|SPB1_USTMA 3 172 + 170 Gaps:12 19.76 921 43.41 1e-26 AdoMet-dependent rRNA methyltransferase SPB1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9DBE9|SPB1_MOUSE 4 150 + 147 Gaps:12 18.74 838 47.13 2e-26 pre-rRNA processing protein FTSJ3 OS Mus musculus GN Ftsj3 PE 1 SV 1
blastp_uniprot_sprot sp|Q5RJT2|SPB1_RAT 4 151 + 148 Gaps:12 19.06 829 46.84 2e-26 pre-rRNA processing protein FTSJ3 OS Rattus norvegicus GN Ftsj3 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZKM1|SPB1_CHICK 4 150 + 147 Gaps:12 18.87 832 43.31 5e-26 pre-rRNA processing protein FTSJ3 OS Gallus gallus GN FTSJ3 PE 2 SV 2
blastp_uniprot_sprot sp|Q52C47|SPB1_MAGO7 4 150 + 147 Gaps:11 18.03 865 41.03 8e-25 AdoMet-dependent rRNA methyltransferase SPB1 OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN SPB1 PE 3 SV 2
blastp_uniprot_sprot sp|Q4WVH3|SPB1_ASPFU 4 151 + 148 Gaps:9 19.75 795 42.04 1e-24 AdoMet-dependent rRNA methyltransferase spb1 OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN spb1 PE 3 SV 1
rpsblast_cdd gnl|CDD|191847 1 150 + 150 Gaps:9 75.00 212 54.72 5e-35 pfam07780 Spb1_C Spb1 C-terminal domain. This presumed domain is found at the C-terminus of a family of FtsJ-like methyltransferases. Members of this family are involved in 60S ribosomal biogenesis.
rpsblast_kog gnl|CDD|36314 2 161 + 160 Gaps:3 20.90 780 56.44 7e-37 KOG1098 KOG1098 KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1 [RNA processing and modification General function prediction only].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 159 159 PTHR10920:SF13 none none IPR028589
Pfam 1 151 151 PF07780 none Spb1 C-terminal domain IPR012920
Coils 67 95 29 Coil none none none
PANTHER 1 159 159 PTHR10920 none none IPR015507

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting