Protein : Qrob_P0299770.2 Q. robur
Protein Identifier  ? Qrob_P0299770.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=2) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase. Code Enzyme  EC:2.1.1.183
Gene Prediction Quality  validated Protein length 

Sequence

Length: 352  
Kegg Orthology  K14191
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0000154 rRNA modification The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically.
GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor.
GO:0008649 rRNA methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s11630g 1 351 + 351 Gaps:10 100.00 353 80.17 0.0 POPTRDRAFT_1099026 hypothetical protein
blastp_kegg lcl|cmo:103487290 1 351 + 351 Gaps:12 100.00 349 81.95 0.0 probable dimethyladenosine transferase
blastp_kegg lcl|pper:PRUPE_ppa008081mg 1 351 + 351 Gaps:13 100.00 346 81.50 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_004803 1 351 + 351 Gaps:18 100.00 347 81.27 0.0 Ribosomal RNA adenine dimethylase family protein
blastp_kegg lcl|rcu:RCOM_0353310 1 351 + 351 Gaps:7 100.00 350 80.29 0.0 dimethyladenosine transferase putative (EC:2.1.1.48)
blastp_kegg lcl|pmum:103334054 1 351 + 351 Gaps:13 100.00 346 80.64 0.0 probable dimethyladenosine transferase
blastp_kegg lcl|vvi:100245295 1 351 + 351 Gaps:9 100.00 350 79.14 0.0 probable dimethyladenosine transferase-like
blastp_kegg lcl|csv:101224611 1 351 + 351 Gaps:6 100.00 349 81.95 0.0 probable dimethyladenosine transferase-like
blastp_kegg lcl|csv:101215363 1 351 + 351 Gaps:6 100.00 349 81.95 0.0 probable dimethyladenosine transferase-like
blastp_kegg lcl|mtr:MTR_3g007750 1 351 + 351 Gaps:10 100.00 351 79.77 0.0 Dimethyladenosine transferase
blastp_pdb 1zq9_B 31 351 + 321 Gaps:42 97.89 285 61.29 1e-115 mol:protein length:285 Probable dimethyladenosine transferase
blastp_pdb 1zq9_A 31 351 + 321 Gaps:42 97.89 285 61.29 1e-115 mol:protein length:285 Probable dimethyladenosine transferase
blastp_pdb 2h1r_B 30 350 + 321 Gaps:48 92.64 299 49.10 1e-80 mol:protein length:299 Dimethyladenosine transferase putative
blastp_pdb 2h1r_A 30 350 + 321 Gaps:48 92.64 299 49.10 1e-80 mol:protein length:299 Dimethyladenosine transferase putative
blastp_pdb 3gry_A 28 234 + 207 Gaps:22 69.49 295 39.51 4e-34 mol:protein length:295 Dimethyladenosine transferase
blastp_pdb 3grv_A 28 234 + 207 Gaps:22 69.49 295 39.51 4e-34 mol:protein length:295 Dimethyladenosine transferase
blastp_pdb 3gru_A 28 234 + 207 Gaps:22 69.49 295 39.51 4e-34 mol:protein length:295 Dimethyladenosine transferase
blastp_pdb 3grr_A 28 234 + 207 Gaps:22 69.49 295 39.51 4e-34 mol:protein length:295 Dimethyladenosine transferase
blastp_pdb 3fyc_B 31 234 + 204 Gaps:22 76.23 265 39.11 5e-34 mol:protein length:265 Probable dimethyladenosine transferase
blastp_pdb 3fyc_A 31 234 + 204 Gaps:22 76.23 265 39.11 5e-34 mol:protein length:265 Probable dimethyladenosine transferase
blastp_uniprot_sprot sp|Q9D0D4|DIM1_MOUSE 22 351 + 330 Gaps:42 92.01 313 60.42 3e-117 Probable dimethyladenosine transferase OS Mus musculus GN Dimt1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UNQ2|DIM1_HUMAN 22 351 + 330 Gaps:42 92.01 313 60.42 4e-117 Probable dimethyladenosine transferase OS Homo sapiens GN DIMT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q2KHT8|DIM1_BOVIN 22 351 + 330 Gaps:42 92.01 313 60.42 1e-116 Probable dimethyladenosine transferase OS Bos taurus GN DIMT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q54QK7|DIM1_DICDI 12 350 + 339 Gaps:40 95.22 314 59.53 2e-116 Probable dimethyladenosine transferase OS Dictyostelium discoideum GN dimt1 PE 3 SV 1
blastp_uniprot_sprot sp|Q95KJ0|DIM1_MACFA 22 351 + 330 Gaps:42 92.01 313 60.07 3e-116 Probable dimethyladenosine transferase OS Macaca fascicularis GN DIMT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VAQ5|DIM1_DROME 5 351 + 347 Gaps:43 99.35 306 56.25 3e-115 Probable dimethyladenosine transferase OS Drosophila melanogaster GN CG11837 PE 2 SV 1
blastp_uniprot_sprot sp|Q6BSY5|DIM1_DEBHA 26 351 + 326 Gaps:30 90.52 327 56.42 3e-112 Dimethyladenosine transferase OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN DIM1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9USU2|DIM1_SCHPO 4 351 + 348 Gaps:42 99.67 307 54.58 1e-110 Dimethyladenosine transferase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN dim1 PE 3 SV 1
blastp_uniprot_sprot sp|P41819|DIM1_YEAST 26 351 + 326 Gaps:37 90.88 318 56.06 5e-106 Dimethyladenosine transferase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN DIM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6FKY3|DIM1_CANGA 26 351 + 326 Gaps:38 90.85 317 55.21 2e-105 Dimethyladenosine transferase OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN DIM1 PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 26 347 322 PS51689 none rRNA adenine N(6)-methyltransferase family profile. IPR001737
Gene3D 21 210 190 G3DSA:3.40.50.150 none none IPR029063
SUPERFAMILY 324 344 21 SSF53335 none none IPR029063
SUPERFAMILY 21 263 243 SSF53335 none none IPR029063
SMART 40 209 170 SM00650 none Ribosomal RNA adenine dimethylases IPR020598
ProSitePatterns 56 83 28 PS01131 none Ribosomal RNA adenine dimethylases signature. IPR020596
PANTHER 309 351 43 PTHR11727 none none IPR001737
PANTHER 21 257 237 PTHR11727 none none IPR001737
TIGRFAM 25 341 317 TIGR00755 none ksgA: ribosomal RNA small subunit methyltransferase A IPR011530
Pfam 26 243 218 PF00398 none Ribosomal RNA adenine dimethylase IPR001737

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting