Protein : Qrob_P0573510.2 Q. robur
Protein Identifier  ? Qrob_P0573510.2 Organism . Name  Quercus robur
Score  7.1 Score Type  egn
Protein Description  (M=1) 2.1.1.170 - 16S rRNA (guanine(527)-N(7))-methyltransferase. Code Enzyme  EC:2.1.1.170
Gene Prediction Quality  validated Protein length 

Sequence

Length: 279  
Kegg Orthology  K03501
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0008649 rRNA methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103437755 15 261 + 247 Gaps:15 84.29 280 76.27 3e-124 uncharacterized LOC103437755
blastp_kegg lcl|cit:102614338 1 261 + 261 Gaps:19 87.20 289 72.22 8e-124 uncharacterized LOC102614338
blastp_kegg lcl|cic:CICLE_v10021480mg 1 261 + 261 Gaps:19 87.20 289 71.83 3e-123 hypothetical protein
blastp_kegg lcl|mdm:103455321 19 261 + 243 Gaps:15 83.75 277 74.57 5e-119 uncharacterized LOC103455321
blastp_kegg lcl|mdm:103424534 15 261 + 247 Gaps:18 84.45 283 72.38 5e-118 uncharacterized LOC103424534
blastp_kegg lcl|rcu:RCOM_1512580 1 261 + 261 Gaps:18 87.59 282 71.66 1e-117 Methyltransferase gidB putative
blastp_kegg lcl|pop:POPTR_0012s07780g 1 261 + 261 Gaps:22 87.15 288 69.32 8e-117 POPTRDRAFT_570046 methyltransferase-related family protein
blastp_kegg lcl|pxb:103942317 33 261 + 229 Gaps:13 59.67 362 77.31 1e-115 uncharacterized LOC103942317
blastp_kegg lcl|fve:101300625 15 260 + 246 Gaps:18 82.91 275 72.81 9e-115 ribosomal RNA small subunit methyltransferase G-like
blastp_kegg lcl|vvi:100262143 1 261 + 261 Gaps:19 87.02 285 70.97 2e-113 ribosomal RNA small subunit methyltransferase G-like
blastp_pdb 1xdz_A 56 261 + 206 Gaps:21 77.08 240 42.16 2e-36 mol:protein length:240 Methyltransferase gidB
blastp_pdb 1jsx_A 56 242 + 187 Gaps:28 76.81 207 41.51 4e-25 mol:protein length:207 Glucose-inhibited division protein B
blastp_pdb 3g8b_B 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8b_A 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_F 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_E 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_D 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_C 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_B 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_pdb 3g8a_A 72 256 + 185 Gaps:21 65.86 249 39.02 2e-17 mol:protein length:249 Ribosomal RNA small subunit methyltransferase
blastp_uniprot_sprot sp|A8MKR7|RSMG_ALKOO 57 261 + 205 Gaps:21 76.99 239 47.83 4e-46 Ribosomal RNA small subunit methyltransferase G OS Alkaliphilus oremlandii (strain OhILAs) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|A6TXE3|RSMG_ALKMQ 57 258 + 202 Gaps:21 75.73 239 47.51 2e-45 Ribosomal RNA small subunit methyltransferase G OS Alkaliphilus metalliredigens (strain QYMF) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|A3DHY6|RSMG_CLOTH 49 256 + 208 Gaps:23 76.45 242 45.41 4e-45 Ribosomal RNA small subunit methyltransferase G OS Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|A8YXD7|RSMG_LACH4 57 258 + 202 Gaps:19 76.25 240 44.26 4e-44 Ribosomal RNA small subunit methyltransferase G OS Lactobacillus helveticus (strain DPC 4571) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|B0K5N2|RSMG_THEPX 63 256 + 194 Gaps:21 72.08 240 45.66 1e-43 Ribosomal RNA small subunit methyltransferase G OS Thermoanaerobacter sp. (strain X514) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|C0ZA63|RSMG_BREBN 56 255 + 200 Gaps:21 75.21 238 45.81 1e-43 Ribosomal RNA small subunit methyltransferase G OS Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|B0K8H7|RSMG_THEP3 63 256 + 194 Gaps:21 72.08 240 45.09 4e-43 Ribosomal RNA small subunit methyltransferase G OS Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|Q5FI43|RSMG_LACAC 50 258 + 209 Gaps:20 78.75 240 43.39 4e-43 Ribosomal RNA small subunit methyltransferase G OS Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|Q97CW4|RSMG_CLOAB 57 276 + 220 Gaps:21 83.26 239 41.21 1e-42 Ribosomal RNA small subunit methyltransferase G OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN rsmG PE 3 SV 1
blastp_uniprot_sprot sp|B8G6Y3|RSMG_CHLAD 49 256 + 208 Gaps:22 78.15 238 43.01 1e-41 Ribosomal RNA small subunit methyltransferase G OS Chloroflexus aggregans (strain MD-66 / DSM 9485) GN rsmG PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 61 259 199 PF02527 none rRNA small subunit methyltransferase G IPR003682
Hamap 54 259 206 MF_00074 none Ribosomal RNA small subunit methyltransferase G [rsmG]. IPR003682
Phobius 211 233 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 234 253 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 53 258 206 G3DSA:3.40.50.150 none none IPR029063
PANTHER 28 259 232 PTHR31760 none none none
Phobius 274 278 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 53 260 208 SSF53335 none none IPR029063
Phobius 1 210 210 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
TIGRFAM 65 258 194 TIGR00138 none rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG IPR003682
Phobius 254 273 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 28 259 232 PTHR31760:SF1 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting