Protein : Qrob_P0328240.2 Q. robur
Protein Identifier  ? Qrob_P0328240.2 Organism . Name  Quercus robur
Score  80.3 Score Type  egn
Protein Description  (M=2) KOG0116//KOG0921//KOG1596 - RasGAP SH3 binding protein rasputin contains NTF2 and RRM domains [Signal transduction mechanisms]. // Dosage compensation complex subunit MLE [Transcription]. // Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification]. Code Enzyme  EC:3.6.4.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 256  
Kegg Orthology  K14563
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0006364 rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa010543mg 66 237 + 172 Gaps:7 71.43 245 81.14 2e-95 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1582870 66 237 + 172 Gaps:6 71.26 247 79.55 1e-93 fibrillarin putative (EC:2.7.11.1)
blastp_kegg lcl|pper:PRUPE_ppa009013mg 70 237 + 168 Gaps:7 55.16 310 81.87 3e-93 hypothetical protein
blastp_kegg lcl|pmum:103336123 70 237 + 168 Gaps:7 55.16 310 81.87 3e-93 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|pop:POPTR_0015s12790g 71 237 + 167 Gaps:7 55.56 306 82.35 1e-92 POPTRDRAFT_808268 hypothetical protein
blastp_kegg lcl|pxb:103958230 66 237 + 172 Gaps:7 56.82 308 80.00 1e-92 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|pmum:103335417 70 237 + 168 Gaps:7 54.46 314 81.29 2e-92 probable mediator of RNA polymerase II transcription subunit 36b
blastp_kegg lcl|pop:POPTR_0012s12860g 70 237 + 168 Gaps:7 55.34 309 80.70 4e-92 POPTRDRAFT_823462 hypothetical protein
blastp_kegg lcl|mdm:103442968 70 237 + 168 Gaps:7 54.98 311 81.29 1e-91 mediator of RNA polymerase II transcription subunit 36a-like
blastp_kegg lcl|mdm:103406558 70 237 + 168 Gaps:7 54.98 311 81.29 1e-91 mediator of RNA polymerase II transcription subunit 36a-like
blastp_pdb 2ipx_A 69 231 + 163 Gaps:3 68.67 233 76.25 1e-80 mol:protein length:233 rRNA 2'-O-methyltransferase fibrillarin
blastp_pdb 1pry_A 77 231 + 155 Gaps:7 66.08 227 53.33 5e-43 mol:protein length:227 Fibrillarin-like pre-rRNA processing protein
blastp_pdb 3nvm_B 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nvk_J 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nvk_I 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nmu_J 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 3nmu_F 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 2nnw_D 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 2nnw_B 77 231 + 155 Gaps:7 64.10 234 53.33 7e-43 mol:protein length:234 Fibrillarin-like rRNA/tRNA 2'-O-methyltransfe
blastp_pdb 1g8a_A 77 231 + 155 Gaps:7 66.08 227 52.00 7e-42 mol:protein length:227 FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
blastp_uniprot_sprot sp|Q94AH9|MD36A_ARATH 66 237 + 172 Gaps:7 54.69 320 77.14 2e-91 Mediator of RNA polymerase II transcription subunit 36a OS Arabidopsis thaliana GN MED36A PE 1 SV 2
blastp_uniprot_sprot sp|Q9FEF8|MD36B_ARATH 66 237 + 172 Gaps:7 56.82 308 77.14 3e-91 Probable mediator of RNA polymerase II transcription subunit 36b OS Arabidopsis thaliana GN MED36B PE 1 SV 1
blastp_uniprot_sprot sp|P35551|FBRL_SCHPO 71 231 + 161 Gaps:2 52.13 305 75.47 7e-81 rRNA 2'-O-methyltransferase fibrillarin OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN fib1 PE 1 SV 1
blastp_uniprot_sprot sp|P35550|FBRL_MOUSE 67 231 + 165 Gaps:3 49.54 327 75.93 7e-80 rRNA 2'-O-methyltransferase fibrillarin OS Mus musculus GN Fbl PE 2 SV 2
blastp_uniprot_sprot sp|P22509|FBRL_RAT 67 231 + 165 Gaps:3 49.54 327 75.93 7e-80 rRNA 2'-O-methyltransferase fibrillarin OS Rattus norvegicus GN Fbl PE 1 SV 2
blastp_uniprot_sprot sp|P22087|FBRL_HUMAN 67 231 + 165 Gaps:3 50.47 321 75.93 7e-80 rRNA 2'-O-methyltransferase fibrillarin OS Homo sapiens GN FBL PE 1 SV 2
blastp_uniprot_sprot sp|P22232|FBRL_XENLA 71 231 + 161 Gaps:5 48.92 323 74.68 7e-77 rRNA 2'-O-methyltransferase fibrillarin OS Xenopus laevis GN fbl PE 2 SV 1
blastp_uniprot_sprot sp|Q8I1F4|FBRL_DROER 74 231 + 158 Gaps:3 44.93 345 76.13 9e-77 rRNA 2'-O-methyltransferase fibrillarin OS Drosophila erecta GN Fib PE 3 SV 1
blastp_uniprot_sprot sp|Q9W1V3|FBRL_DROME 74 231 + 158 Gaps:3 45.06 344 75.48 5e-76 rRNA 2'-O-methyltransferase fibrillarin OS Drosophila melanogaster GN Fib PE 2 SV 1
blastp_uniprot_sprot sp|A6NHQ2|FBLL1_HUMAN 77 231 + 155 Gaps:3 45.65 333 75.66 1e-75 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS Homo sapiens GN FBLL1 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 7 231 225 PTHR10335 none none none
Pfam 77 233 157 PF01269 none Fibrillarin IPR000692
Gene3D 70 125 56 G3DSA:3.30.200.20 none none none
Gene3D 126 232 107 G3DSA:3.40.50.150 none none IPR029063
SUPERFAMILY 77 231 155 SSF53335 none none IPR029063
ProSitePatterns 173 187 15 PS00566 none Fibrillarin signature. IPR020813
PRINTS 93 112 20 PR00052 none Fibrillarin signature IPR000692
PRINTS 173 190 18 PR00052 none Fibrillarin signature IPR000692
PRINTS 121 140 20 PR00052 none Fibrillarin signature IPR000692
PRINTS 198 227 30 PR00052 none Fibrillarin signature IPR000692
PRINTS 148 169 22 PR00052 none Fibrillarin signature IPR000692

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting