QTLTerm :

Qtl Name  NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Chromosome Name  Qrob_Chr09
Linkage Group  9 Prox Marker  s_1C1GRV_1289
Dist Marker  s_1BOL3D_361 Position QTL  2.56
Pos One  0 Pos Two  12,57
Test Type  lod Test Value  6.9263
R 2  0.028 QTL Detection Name  d13Cf_2001

386 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0116930.2 Quercus robur 38.8 egn (M=1) KOG0192//KOG0194//KOG0197//KOG0444//KOG0472//KOG0575//KOG0578//KOG0581//KOG0618//KOG1187 - Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]. // Protein tyrosine kinase [Signal transduction mechanisms]. // Tyrosine kinases [Signal transduction mechanisms]. // Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Polo-like serine/threonine protein kinase [Cell cycle control cell division chromosome partitioning]. // p21-activated serine/threonine protein kinase [Signal transduction mechanisms]. // Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Serine/threonine protein kinase [Signal transduction mechanisms].   EC:2.7.11.1 validated
Qrob_P0116940.2 Quercus robur 0.0 egn       validated
Qrob_P0116960.2 Quercus robur 22.4 egn (M=1) PTHR11476:SF1 - HISTIDYL-TRNA SYNTHETASE   EC:6.1.1.21 validated
Qrob_P0117000.2 Quercus robur 0.0 egn (M=2) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED (PTHR31412:SF2)     validated
Qrob_P0117030.2 Quercus robur 51.2 egn (M=1) KOG1343//KOG1942//KOG3211 - Histone deacetylase complex catalytic component HDA1 [Chromatin structure and dynamics]. // DNA helicase TBP-interacting protein [Replication recombination and repair]. // Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only].   EC:3.5.1.98 validated
Qrob_P0117040.2 Quercus robur 100.0 egn (M=2) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED (PTHR31412:SF2)     validated
Qrob_P0156870.2 Quercus robur 100.0 egn (M=19) KOG0406//KOG0867//KOG0868//KOG1422 - Glutathione S-transferase [Posttranslational modification protein turnover chaperones]. // Glutathione S-transferase [Posttranslational modification protein turnover chaperones]. // Glutathione S-transferase [Posttranslational modification protein turnover chaperones]. // Intracellular Cl- channel CLIC contains GST domain [Inorganic ion transport and metabolism].   EC:2.5.1.18 validated
Qrob_P0156890.2 Quercus robur 0.0 egn (M=1) KOG0519//KOG3197 - Sensory transduction histidine kinase [Signal transduction mechanisms]. // Predicted hydrolases of HD superfamily [General function prediction only].   EC:2.7.13.3 validated
Qrob_P0156900.2 Quercus robur 0.0 egn (M=460) PTHR11017//PTHR11017:SF146 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED     validated
Qrob_P0156910.2 Quercus robur 0.0 egn (M=7) PF00560//PF00931//PF07725//PF13504 - Leucine Rich Repeat // NB-ARC domain // Leucine Rich Repeat // Leucine rich repeat     validated
Qrob_P0156930.2 Quercus robur     (M=1) KOG0444//KOG0472//KOG0532//KOG0617//KOG0618//KOG4194//KOG4579//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]. // Apoptotic ATPase [Signal transduction mechanisms]. Qrob_P0780430.1   manual_v1
Qrob_P0156950.2 Quercus robur 11.3 egn (M=1) PF00931//PF01582//PF07725//PF12799//PF13855 - NB-ARC domain // TIR domain // Leucine Rich Repeat // Leucine Rich repeats (2 copies) // Leucine rich repeat     validated
Qrob_P0156970.2 Quercus robur 11.1 egn (M=11) PF00560//PF00931//PF01582//PF07725 - Leucine Rich Repeat // NB-ARC domain // TIR domain // Leucine Rich Repeat     validated
Qrob_P0156980.2 Quercus robur 0.0 egn (M=6) PF00560//PF07725//PF13504 - Leucine Rich Repeat // Leucine Rich Repeat // Leucine rich repeat     validated
Qrob_P0156990.2 Quercus robur 62.2 egn (M=2) KOG0444//KOG0472//KOG0531//KOG0532//KOG0617//KOG0618//KOG1947//KOG4194//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Leucine rich repeat proteins some proteins contain F-box [General function prediction only]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms].     validated
Qrob_P0157010.2 Quercus robur 0.0 egn (M=7) KOG0444//KOG0532//KOG0618//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms].     validated
Qrob_P0157020.2 Quercus robur     (M=1) KOG0444//KOG0472//KOG0532//KOG0617//KOG0618//KOG2120//KOG4194//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // SCF ubiquitin ligase Skp2 component [Posttranslational modification protein turnover chaperones]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Qrob_P0757090.1   manual_v1
Qrob_P0157030.2 Quercus robur 100.0 egn (M=2) K12831 - splicing factor 3B subunit 4     validated
Qrob_P0157040.2 Quercus robur 0.0 egn (M=8) K13963 - serpin B     validated
Qrob_P0157050.2 Quercus robur 0.0 egn (M=10) KOG2392 - Serpin [Defense mechanisms].     validated
Qrob_P0157060.2 Quercus robur 0.0 egn (M=8) K13963 - serpin B     validated
Qrob_P0157070.2 Quercus robur 0.0 egn (M=9) PTHR11461 - SERINE PROTEASE INHIBITOR, SERPIN     validated
Qrob_P0157080.2 Quercus robur 0.0 egn (M=8) K13963 - serpin B     validated
Qrob_P0157100.2 Quercus robur 0.0 egn (M=8) K13963 - serpin B     validated
Qrob_P0157110.2 Quercus robur 90.1 egn (M=1) PTHR22298//PTHR22298:SF20 - ENDO-1,4-BETA-GLUCANASE // SUBFAMILY NOT NAMED   EC:3.2.1.4 validated
Qrob_P0157120.2 Quercus robur 100.0 egn (M=6) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase.   EC:3.2.1.78 validated
Qrob_P0157130.2 Quercus robur 100.0 egn (M=1) K17541 - SCY1-like protein 2   EC:2.7.11.22 validated
Qrob_P0157160.2 Quercus robur 0.0 egn (M=3) PF00560//PF08263//PF13504 - Leucine Rich Repeat // Leucine rich repeat N-terminal domain // Leucine rich repeat     validated
Qrob_P0157180.2 Quercus robur 0.0 egn       validated
Qrob_P0157190.2 Quercus robur 0.0 egn (M=1) KOG0317//KOG0802//KOG0804//KOG4628 - Predicted E3 ubiquitin ligase integral peroxisomal membrane protein [Posttranslational modification protein turnover chaperones]. // E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones]. // Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]. // Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].   EC:6.3.2.19 validated