Protein : Qrob_P0156900.2 Q. robur
Protein Identifier  ? Qrob_P0156900.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=460) PTHR11017//PTHR11017:SF146 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 171  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s22420g 10 170 + 161 Gaps:1 91.95 174 51.88 8e-53 hypothetical protein
blastp_kegg lcl|pxb:103962375 3 169 + 167 Gaps:2 21.85 755 53.33 8e-50 TMV resistance protein N-like
blastp_kegg lcl|mdm:103423183 9 170 + 162 Gaps:1 80.90 199 51.55 2e-49 TMV resistance protein N-like
blastp_kegg lcl|mdm:103417307 1 169 + 169 Gaps:1 99.41 169 48.81 3e-49 TMV resistance protein N-like
blastp_kegg lcl|fve:101293148 9 166 + 158 Gaps:2 80.83 193 53.85 5e-49 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa022061mg 21 169 + 149 Gaps:2 90.18 163 57.82 6e-48 hypothetical protein
blastp_kegg lcl|pxb:103963109 10 169 + 160 Gaps:2 21.12 748 55.70 3e-47 TMV resistance protein N-like
blastp_kegg lcl|pmum:103336495 21 169 + 149 Gaps:2 18.61 790 59.18 1e-46 TMV resistance protein N-like
blastp_kegg lcl|fve:101310940 1 163 + 163 Gaps:5 94.61 167 53.80 2e-46 TMV resistance protein N-like
blastp_kegg lcl|mdm:103434651 1 169 + 169 Gaps:1 99.41 169 47.62 2e-46 TMV resistance protein N-like
blastp_pdb 3ozi_B 6 165 + 160 Gaps:4 77.45 204 48.73 6e-42 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 6 165 + 160 Gaps:4 77.45 204 48.73 6e-42 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 15 164 + 150 Gaps:7 83.52 176 44.90 2e-32 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 22 164 + 143 Gaps:1 12.41 1144 53.52 4e-39 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 15 164 + 150 Gaps:7 83.52 176 44.90 7e-32 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 13 166 + 154 Gaps:9 14.16 1095 43.23 2e-29 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 14 168 + 155 Gaps:5 11.53 1301 43.33 3e-25 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FHE8|P2A06_ARATH 9 170 + 162 Gaps:9 40.56 392 33.96 3e-17 Protein PHLOEM PROTEIN 2-LIKE A6 OS Arabidopsis thaliana GN PP2A6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 10 170 + 161 Gaps:17 44.63 354 32.28 1e-16 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5Q9|P2A05_ARATH 24 163 + 140 Gaps:11 33.33 411 36.50 4e-16 Protein PHLOEM PROTEIN 2-LIKE A5 OS Arabidopsis thaliana GN PP2A5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 7 164 + 158 Gaps:4 27.32 571 32.69 4e-15 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 11 165 + 155 Gaps:4 13.10 1153 43.05 4e-29 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|197607 21 162 + 142 Gaps:6 100.00 140 40.00 8e-26 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|201870 24 157 + 134 Gaps:3 100.00 135 41.48 3e-25 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|178736 14 125 + 112 Gaps:5 57.22 187 35.51 2e-07 PLN03194 PLN03194 putative disease resistance protein Provisional.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 11 165 155 SSF52200 none none IPR000157
PANTHER 9 170 162 PTHR11017:SF146 none none none
ProSiteProfiles 20 162 143 PS50104 none TIR domain profile. IPR000157
Gene3D 19 156 138 G3DSA:3.40.50.10140 none none IPR000157
Pfam 24 157 134 PF01582 none TIR domain IPR000157
PANTHER 9 170 162 PTHR11017 none none none
SMART 21 162 142 SM00255 none Toll - interleukin 1 - resistance IPR000157

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 95   Mitochondrion 5 0.043 0.576 NON-PLANT 95