Protein : Qrob_P0116930.2 Q. robur
Protein Identifier  ? Qrob_P0116930.2 Organism . Name  Quercus robur
Score  38.8 Score Type  egn
Protein Description  (M=1) KOG0192//KOG0194//KOG0197//KOG0444//KOG0472//KOG0575//KOG0578//KOG0581//KOG0618//KOG1187 - Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]. // Protein tyrosine kinase [Signal transduction mechanisms]. // Tyrosine kinases [Signal transduction mechanisms]. // Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Polo-like serine/threonine protein kinase [Cell cycle control cell division chromosome partitioning]. // p21-activated serine/threonine protein kinase [Signal transduction mechanisms]. // Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Serine/threonine protein kinase [Signal transduction mechanisms]. Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1057  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004672 protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO:0006468 protein phosphorylation The process of introducing a phosphate group on to a protein.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100243949 2 1056 + 1055 Gaps:36 99.52 1038 62.63 0.0 probable LRR receptor-like serine/threonine-protein kinase At4g08850-like
blastp_kegg lcl|vvi:100261069 2 1056 + 1055 Gaps:37 99.52 1037 61.63 0.0 probable LRR receptor-like serine/threonine-protein kinase At4g08850-like
blastp_kegg lcl|vvi:100254218 1 1056 + 1056 Gaps:34 99.61 1032 60.99 0.0 probable LRR receptor-like serine/threonine-protein kinase At4g08850-like
blastp_kegg lcl|pper:PRUPE_ppa025153mg 33 1055 + 1023 Gaps:16 91.89 1122 58.39 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_034915 29 1055 + 1027 Gaps:28 97.57 1030 59.20 0.0 Receptor protein kinase putative
blastp_kegg lcl|vvi:100255980 17 1056 + 1040 Gaps:59 92.67 1078 60.06 0.0 probable LRR receptor-like serine/threonine-protein kinase At4g08850-like
blastp_kegg lcl|pxb:103929888 23 1055 + 1033 Gaps:91 95.47 1171 53.76 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|pxb:103929878 23 1055 + 1033 Gaps:91 95.47 1171 53.76 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|fve:101296677 19 1055 + 1037 Gaps:56 96.10 1052 58.75 0.0 probable LRR receptor-like serine/threonine-protein kinase At4g08850-like
blastp_kegg lcl|pmum:103326762 10 1055 + 1046 Gaps:43 96.22 1111 55.47 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_pdb 3rj0_A 25 702 + 678 Gaps:116 95.60 772 30.76 5e-58 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 25 702 + 678 Gaps:116 95.60 772 30.76 5e-58 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 27 702 + 676 Gaps:116 95.83 768 30.84 9e-58 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 27 702 + 676 Gaps:116 95.83 768 30.84 9e-58 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3tl8_H 778 1054 + 277 Gaps:23 81.38 349 36.97 4e-50 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_G 778 1054 + 277 Gaps:23 81.38 349 36.97 4e-50 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_D 778 1054 + 277 Gaps:23 81.38 349 36.97 4e-50 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_A 778 1054 + 277 Gaps:23 81.38 349 36.97 4e-50 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 2o8y_B 777 1054 + 278 Gaps:31 95.64 298 33.33 6e-32 mol:protein length:298 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2o8y_A 777 1054 + 278 Gaps:31 95.64 298 33.33 6e-32 mol:protein length:298 Interleukin-1 receptor-associated kinase 4
blastp_uniprot_sprot sp|Q8VZG8|Y4885_ARATH 7 1055 + 1049 Gaps:66 96.94 1045 52.22 0.0 Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS Arabidopsis thaliana GN At4g08850 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LP24|Y1571_ARATH 32 1055 + 1024 Gaps:95 97.23 1120 48.39 0.0 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS Arabidopsis thaliana GN At1g35710 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHI2|Y1723_ARATH 15 1055 + 1041 Gaps:64 96.73 1101 38.87 0.0 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS Arabidopsis thaliana GN At1g17230 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LVP0|Y5639_ARATH 30 1054 + 1025 Gaps:73 95.46 1102 38.78 0.0 Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS Arabidopsis thaliana GN At5g63930 PE 1 SV 1
blastp_uniprot_sprot sp|O49318|Y2317_ARATH 75 1054 + 980 Gaps:73 92.08 1124 36.91 0.0 Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS Arabidopsis thaliana GN At2g33170 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 45 1046 + 1002 Gaps:220 93.67 1249 53.76 0.0 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGV1|RCH1_ARATH 8 1056 + 1049 Gaps:117 92.33 1135 36.26 2e-176 LRR receptor-like serine/threonine-protein kinase RCH1 OS Arabidopsis thaliana GN RCH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LHP4|RCH2_ARATH 45 1054 + 1010 Gaps:107 90.18 1141 35.57 7e-176 Receptor-like protein kinase 2 OS Arabidopsis thaliana GN RCH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FZ59|PEPR2_ARATH 59 1055 + 997 Gaps:88 96.69 1088 41.73 1e-175 Leucine-rich repeat receptor-like protein kinase PEPR2 OS Arabidopsis thaliana GN PEPR2 PE 1 SV 1
blastp_uniprot_sprot sp|P93194|RPK1_IPONI 26 1056 + 1031 Gaps:112 96.93 1109 35.35 2e-175 Receptor-like protein kinase OS Ipomoea nil GN INRPK1 PE 2 SV 2

76 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 593 614 22 PS51450 none Leucine-rich repeat profile. IPR001611
Gene3D 715 791 77 G3DSA:2.60.120.200 none none IPR013320
Pfam 521 557 37 PF12799 none Leucine Rich repeats (2 copies) IPR025875
ProSiteProfiles 161 183 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 377 399 23 PS51450 none Leucine-rich repeat profile. IPR001611
Phobius 19 36 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSiteProfiles 521 544 24 PS51450 none Leucine-rich repeat profile. IPR001611
PANTHER 241 402 162 PTHR24420 none none none
PANTHER 602 653 52 PTHR24420 none none none
PANTHER 523 558 36 PTHR24420 none none none
PANTHER 678 1056 379 PTHR24420 none none none
PANTHER 1 98 98 PTHR24420 none none none
PANTHER 148 216 69 PTHR24420 none none none
Gene3D 296 463 168 G3DSA:3.80.10.10 none none none
Gene3D 464 702 239 G3DSA:3.80.10.10 none none none
Phobius 37 720 684 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 792 851 60 G3DSA:3.30.200.20 none none none
SUPERFAMILY 765 1054 290 SSF56112 none none IPR011009
ProSiteProfiles 257 278 22 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 113 135 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 787 1056 270 PS50011 none Protein kinase domain profile. IPR000719
Phobius 1 36 36 SIGNAL_PEPTIDE none Signal peptide region none
SMART 255 281 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 543 564 22 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 375 401 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 567 593 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 327 353 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 207 233 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 615 641 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

4 Localization

Analysis Start End Length
SignalP_EUK 1 27 26
TMHMM 723 745 22
SignalP_GRAM_POSITIVE 1 26 25
SignalP_GRAM_NEGATIVE 1 26 25

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.925 0.032 NON-PLANT 27