Protein : Qrob_P0156930.2 Q. robur
Protein Identifier  ? Qrob_P0156930.2 Organism . Name  Quercus robur
Protein Description  (M=1) KOG0444//KOG0472//KOG0532//KOG0617//KOG0618//KOG4194//KOG4579//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]. // Apoptotic ATPase [Signal transduction mechanisms]. Alias (in v1)  Qrob_P0780430.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 1247  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103935009 9 1175 + 1167 Gaps:63 94.75 1239 48.21 0.0 TMV resistance protein N-like
blastp_kegg lcl|mdm:103413472 4 1163 + 1160 Gaps:59 91.43 1272 47.81 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023938mg 27 1211 + 1185 Gaps:66 94.02 1254 46.23 0.0 hypothetical protein
blastp_kegg lcl|vvi:100264833 13 1156 + 1144 Gaps:69 95.13 1233 44.67 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103956600 25 1152 + 1128 Gaps:102 71.37 1645 44.55 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103939877 25 959 + 935 Gaps:24 71.75 1292 50.70 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10024735mg 27 1211 + 1185 Gaps:89 98.74 1189 45.14 0.0 hypothetical protein
blastp_kegg lcl|cit:102619279 21 1211 + 1191 Gaps:139 98.87 1242 44.54 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103958003 11 1151 + 1141 Gaps:78 93.43 1232 44.66 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103939875 25 959 + 935 Gaps:24 55.74 1663 50.70 0.0 TMV resistance protein N-like
blastp_pdb 3ozi_B 12 195 + 184 Gaps:6 89.22 204 48.35 5e-46 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 12 195 + 184 Gaps:6 89.22 204 48.35 5e-46 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 27 191 + 165 Gaps:3 92.05 176 44.44 2e-33 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 25 1050 + 1026 Gaps:64 87.76 1144 38.84 0.0 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 9 814 + 806 Gaps:84 74.34 1095 39.56 2e-145 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 19 967 + 949 Gaps:157 87.32 1301 44.10 2e-134 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 27 840 + 814 Gaps:64 41.27 1895 36.06 4e-110 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 38 964 + 927 Gaps:169 57.73 1372 37.12 8e-83 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 38 987 + 950 Gaps:180 65.22 1288 38.21 1e-78 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 41 964 + 924 Gaps:253 51.21 1613 35.71 9e-71 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 27 191 + 165 Gaps:3 92.05 176 44.44 9e-33 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 10 192 + 183 Gaps:11 50.28 354 34.83 4e-23 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZ25|DRL30_ARATH 204 840 + 637 Gaps:167 73.49 811 30.87 8e-22 Probable disease resistance protein At5g04720 OS Arabidopsis thaliana GN At5g04720 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 9 1032 + 1024 Gaps:139 84.74 1153 37.67 1e-144 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 30 162 + 133 Gaps:2 100.00 135 43.70 2e-34 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|201512 209 464 + 256 Gaps:22 90.53 285 29.07 4e-30 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|197607 27 167 + 141 Gaps:5 100.00 140 40.00 8e-30 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 15 130 + 116 Gaps:9 57.22 187 41.12 1e-13 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|34495 677 985 + 309 Gaps:58 73.10 394 40.28 6e-12 COG4886 COG4886 Leucine-rich repeat (LRR) protein [Function unknown].
rpsblast_cdd gnl|CDD|205852 30 129 + 100 Gaps:9 89.22 102 24.18 4e-08 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 901 924 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 878 900 23 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 740 763 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 811 833 23 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Pfam 789 845 57 PF13855 none Leucine rich repeat IPR001611
Gene3D 604 851 248 G3DSA:3.80.10.10 none none none
SUPERFAMILY 434 537 104 SSF46785 none none none
Coils 283 304 22 Coil none none none
Gene3D 225 376 152 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 26 167 142 PS50104 none TIR domain profile. IPR000157
PANTHER 1 739 739 PTHR11017 none none none
SUPERFAMILY 566 853 288 SSF52058 none none none
Gene3D 852 964 113 G3DSA:3.80.10.10 none none none
Pfam 223 464 242 PF00931 none NB-ARC domain IPR002182
PANTHER 907 982 76 PTHR11017 none none none
PANTHER 790 807 18 PTHR11017 none none none
Gene3D 25 144 120 G3DSA:3.40.50.10140 none none IPR000157
PANTHER 1 739 739 PTHR11017:SF146 none none none
PANTHER 907 982 76 PTHR11017:SF146 none none none
PANTHER 790 807 18 PTHR11017:SF146 none none none
PRINTS 227 242 16 PR00364 none Disease resistance protein signature none
PRINTS 303 317 15 PR00364 none Disease resistance protein signature none
PRINTS 785 801 17 PR00364 none Disease resistance protein signature none
PRINTS 397 411 15 PR00364 none Disease resistance protein signature none
Pfam 903 922 20 PF00560 none Leucine Rich Repeat IPR001611
Pfam 881 899 19 PF00560 none Leucine Rich Repeat IPR001611
Pfam 766 786 21 PF00560 none Leucine Rich Repeat IPR001611
SMART 27 167 141 SM00255 none Toll - interleukin 1 - resistance IPR000157
SUPERFAMILY 193 456 264 SSF52540 none none IPR027417
SUPERFAMILY 18 170 153 SSF52200 none none IPR000157

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting