Protein : Qrob_P0156950.2 Q. robur
Protein Identifier  ? Qrob_P0156950.2 Organism . Name  Quercus robur
Score  11.3 Score Type  egn
Protein Description  (M=1) PF00931//PF01582//PF07725//PF12799//PF13855 - NB-ARC domain // TIR domain // Leucine Rich Repeat // Leucine Rich repeats (2 copies) // Leucine rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1213  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103935009 13 1128 + 1116 Gaps:134 94.11 1239 45.71 0.0 TMV resistance protein N-like
blastp_kegg lcl|mdm:103413472 13 1128 + 1116 Gaps:133 91.59 1272 45.32 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023938mg 24 1168 + 1145 Gaps:166 94.02 1254 42.32 0.0 hypothetical protein
blastp_kegg lcl|pxb:103939877 20 1108 + 1089 Gaps:171 90.40 1292 42.12 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103958003 13 1102 + 1090 Gaps:163 92.94 1232 41.75 0.0 TMV resistance protein N-like
blastp_kegg lcl|vvi:100256761 25 1158 + 1134 Gaps:185 94.48 1250 41.15 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10024485mg 19 986 + 968 Gaps:145 99.90 1022 44.66 0.0 hypothetical protein
blastp_kegg lcl|vvi:100264833 23 1116 + 1094 Gaps:135 94.32 1233 40.84 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103956600 20 1109 + 1090 Gaps:174 71.37 1645 41.23 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10018572mg 13 1168 + 1156 Gaps:213 99.49 1173 43.19 0.0 hypothetical protein
blastp_pdb 3ozi_B 14 155 + 142 Gaps:5 72.06 204 46.26 2e-31 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 14 155 + 142 Gaps:5 72.06 204 46.26 2e-31 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 13 173 + 161 Gaps:17 95.45 176 39.88 7e-28 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 20 994 + 975 Gaps:168 87.85 1144 36.92 4e-172 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 14 758 + 745 Gaps:125 77.26 1095 32.62 5e-123 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 25 881 + 857 Gaps:285 85.32 1301 40.09 3e-112 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 19 868 + 850 Gaps:170 41.64 1895 36.88 1e-88 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 35 759 + 725 Gaps:137 62.27 1288 31.55 5e-82 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 35 742 + 708 Gaps:150 56.12 1372 32.86 4e-80 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 40 742 + 703 Gaps:132 48.17 1613 29.60 7e-66 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 13 173 + 161 Gaps:17 95.45 176 39.88 3e-27 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9LVT1|DRL39_ARATH 205 751 + 547 Gaps:121 92.78 623 25.61 5e-20 Putative disease resistance protein At5g47280 OS Arabidopsis thaliana GN At5g47280 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LZ25|DRL30_ARATH 200 821 + 622 Gaps:156 71.64 811 30.64 7e-19 Probable disease resistance protein At5g04720 OS Arabidopsis thaliana GN At5g04720 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 13 976 + 964 Gaps:98 79.71 1153 37.32 3e-92 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 27 154 + 128 Gaps:5 98.52 135 43.61 4e-30 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 24 155 + 132 Gaps:10 95.71 140 41.04 3e-26 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|201512 191 393 + 203 Gaps:61 89.82 285 27.73 8e-20 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178736 26 127 + 102 Gaps:4 52.41 187 38.78 1e-12 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 27 123 + 97 Gaps:6 89.22 102 27.47 6e-10 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.
rpsblast_cdd gnl|CDD|177728 617 849 + 233 Gaps:53 40.08 968 31.19 2e-08 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.

34 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 704 723 20 PTHR11017:SF146 none none none
PANTHER 824 899 76 PTHR11017:SF146 none none none
Pfam 557 575 19 PF07725 none Leucine Rich Repeat IPR011713
Pfam 27 154 128 PF01582 none TIR domain IPR000157
Gene3D 207 255 49 G3DSA:3.40.50.300 none none IPR027417
PANTHER 13 671 659 PTHR11017:SF146 none none none
ProSiteProfiles 797 818 22 PS51450 none Leucine-rich repeat profile. IPR001611
SUPERFAMILY 170 387 218 SSF52540 none none IPR027417
ProSiteProfiles 703 722 20 PS51450 none Leucine-rich repeat profile. IPR001611
Pfam 703 759 57 PF13855 none Leucine rich repeat IPR001611
PANTHER 13 671 659 PTHR11017 none none none
ProSiteProfiles 727 748 22 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 674 695 22 PS51450 none Leucine-rich repeat profile. IPR001611
Pfam 797 834 38 PF12799 none Leucine Rich repeats (2 copies) IPR025875
Pfam 264 393 130 PF00931 none NB-ARC domain IPR002182
Pfam 191 249 59 PF00931 none NB-ARC domain IPR002182
Gene3D 793 881 89 G3DSA:3.80.10.10 none none none
Gene3D 22 143 122 G3DSA:3.40.50.10140 none none IPR000157
SUPERFAMILY 14 152 139 SSF52200 none none IPR000157
Coils 340 361 22 Coil none none none
ProSiteProfiles 23 161 139 PS50104 none TIR domain profile. IPR000157
PANTHER 704 723 20 PTHR11017 none none none
PANTHER 824 899 76 PTHR11017 none none none
PRINTS 209 224 16 PR00364 none Disease resistance protein signature none
PRINTS 699 715 17 PR00364 none Disease resistance protein signature none
ProSiteProfiles 582 602 21 PS51450 none Leucine-rich repeat profile. IPR001611
SUPERFAMILY 498 883 386 SSF52058 none none none
SUPERFAMILY 432 448 17 SSF52058 none none none
ProSiteProfiles 820 841 22 PS51450 none Leucine-rich repeat profile. IPR001611
SMART 818 841 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting