Protein : Qrob_P0157190.2 Q. robur
Protein Identifier  ? Qrob_P0157190.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0317//KOG0802//KOG0804//KOG4628 - Predicted E3 ubiquitin ligase integral peroxisomal membrane protein [Posttranslational modification protein turnover chaperones]. // E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones]. // Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]. // Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 101  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016054mg 24 94 + 71 Gaps:1 34.31 204 52.86 8e-18 hypothetical protein
blastp_kegg lcl|bmor:101743467 1 92 + 92 Gaps:4 64.38 146 35.11 6e-17 E3 ubiquitin-protein ligase RNF181-like
blastp_kegg lcl|dosa:Os12t0140200-00 20 89 + 70 Gaps:2 35.18 199 52.86 7e-17 Os12g0140200 Zinc finger RING/FYVE/PHD-type domain containing protein.
blastp_kegg lcl|osa:9267810 20 89 + 70 Gaps:2 35.18 199 52.86 7e-17 Os12g0140233
blastp_kegg lcl|dosa:Os12t0140700-01 20 92 + 73 Gaps:2 37.06 197 50.68 9e-17 Os12g0140700 Zinc finger RING/FYVE/PHD-type domain containing protein.
blastp_kegg lcl|osa:4351468 20 92 + 73 Gaps:2 37.06 197 50.68 9e-17 Os12g0140700
blastp_kegg lcl|pmum:103338435 24 94 + 71 Gaps:1 32.11 218 52.86 1e-16 E3 ubiquitin-protein ligase At3g02290-like
blastp_kegg lcl|pop:POPTR_0001s09420g 3 92 + 90 Gaps:17 47.42 213 39.60 4e-16 POPTRDRAFT_751320 hypothetical protein
blastp_kegg lcl|tcc:TCM_043211 24 89 + 66 Gaps:2 19.34 331 51.56 9e-16 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s06320g 8 89 + 82 Gaps:1 33.74 246 43.37 1e-15 POPTRDRAFT_759973 hypothetical protein
blastp_pdb 2ect_A 45 95 + 51 none 65.38 78 43.14 2e-11 mol:protein length:78 RING finger protein 126
blastp_pdb 2l0b_A 24 86 + 63 Gaps:5 74.73 91 35.29 7e-10 mol:protein length:91 E3 ubiquitin-protein ligase Praja-1
blastp_pdb 2ep4_A 45 98 + 54 Gaps:2 75.68 74 41.07 1e-08 mol:protein length:74 RING finger protein 24
blastp_pdb 2kiz_A 45 95 + 51 none 73.91 69 35.29 5e-08 mol:protein length:69 E3 ubiquitin-protein ligase Arkadia
blastp_uniprot_sprot sp|Q8LPN7|RNG1L_ARATH 20 92 + 73 Gaps:4 23.48 328 40.26 3e-12 E3 ubiquitin-protein ligase RING1-like OS Arabidopsis thaliana GN At3g19950 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZW78|RN181_DANRE 45 94 + 50 none 32.05 156 52.00 5e-12 E3 ubiquitin-protein ligase RNF181 OS Danio rerio GN rnf181 PE 2 SV 2
blastp_uniprot_sprot sp|Q6GPV5|RN181_XENLA 45 100 + 56 Gaps:6 39.74 156 46.77 5e-12 E3 ubiquitin-protein ligase RNF181 OS Xenopus laevis GN rnf181 PE 2 SV 1
blastp_uniprot_sprot sp|Q6IRP0|R126B_XENLA 45 95 + 51 none 16.35 312 47.06 6e-12 RING finger protein 126-B OS Xenopus laevis GN rnf126-b PE 2 SV 1
blastp_uniprot_sprot sp|Q6DIP3|RN126_XENTR 45 95 + 51 none 16.40 311 47.06 7e-12 E3 ubiquitin-protein ligase RNF126 OS Xenopus tropicalis GN rnf126 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CY62|RN181_MOUSE 35 100 + 66 Gaps:6 43.64 165 43.06 9e-12 E3 ubiquitin-protein ligase RNF181 OS Mus musculus GN Rnf181 PE 2 SV 1
blastp_uniprot_sprot sp|Q0II22|RN126_BOVIN 20 95 + 76 Gaps:3 25.24 313 36.71 1e-11 E3 ubiquitin-protein ligase RNF126 OS Bos taurus GN RNF126 PE 2 SV 1
blastp_uniprot_sprot sp|Q5M974|RN181_XENTR 45 92 + 48 none 30.77 156 52.08 1e-11 E3 ubiquitin-protein ligase RNF181 OS Xenopus tropicalis GN rnf181 PE 2 SV 1
blastp_uniprot_sprot sp|Q7T0Q3|R126A_XENLA 45 95 + 51 none 16.35 312 47.06 2e-11 RING finger protein 126-A OS Xenopus laevis GN rnf126-a PE 2 SV 1
blastp_uniprot_sprot sp|Q91YL2|RN126_MOUSE 20 95 + 76 Gaps:3 25.24 313 36.71 3e-11 E3 ubiquitin-protein ligase RNF126 OS Mus musculus GN Rnf126 PE 1 SV 1
rpsblast_cdd gnl|CDD|205816 45 86 + 42 none 91.30 46 50.00 2e-10 pfam13639 zf-RING_2 Ring finger domain.
rpsblast_cdd gnl|CDD|35099 24 86 + 63 Gaps:2 17.38 374 33.85 2e-09 COG5540 COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|39828 2 86 + 85 Gaps:6 25.57 348 30.34 5e-10 KOG4628 KOG4628 KOG4628 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|36020 16 90 + 75 Gaps:3 14.00 543 31.58 2e-08 KOG0802 KOG0802 KOG0802 E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35538 45 86 + 42 Gaps:3 13.31 293 48.72 5e-07 KOG0317 KOG0317 KOG0317 Predicted E3 ubiquitin ligase integral peroxisomal membrane protein [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|36022 45 87 + 43 Gaps:5 8.52 493 42.86 7e-07 KOG0804 KOG0804 KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 44 86 43 PF13639 none Ring finger domain IPR001841
ProSiteProfiles 45 86 42 PS50089 none Zinc finger RING-type profile. IPR001841
SMART 45 85 41 SM00184 none Ring finger IPR001841
PANTHER 24 92 69 PTHR22763 none none none
Gene3D 43 89 47 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 44 91 48 SSF57850 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting