Protein : Qrob_P0157100.2 Q. robur
Protein Identifier  ? Qrob_P0157100.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) K13963 - serpin B Gene Prediction Quality  validated
Protein length 

Sequence

Length: 386  
Kegg Orthology  K13963
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005615 extracellular space That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0790520 3 384 + 382 Gaps:23 95.99 399 46.48 2e-109 Protein Z putative
blastp_kegg lcl|pop:POPTR_0017s13520g 7 384 + 378 Gaps:9 99.47 379 46.95 4e-108 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1591990 1 382 + 382 Gaps:7 96.42 391 44.83 4e-107 Protein Z putative (EC:2.7.11.1)
blastp_kegg lcl|rcu:RCOM_0790540 36 384 + 349 Gaps:8 99.16 356 45.61 2e-105 Protein Z putative
blastp_kegg lcl|fve:101291206 5 383 + 379 Gaps:7 95.63 389 43.82 4e-105 serpin-ZX-like
blastp_kegg lcl|pxb:103953970 4 385 + 382 Gaps:7 96.65 388 44.53 7e-105 serpin-ZX-like
blastp_kegg lcl|tcc:TCM_033920 4 383 + 380 Gaps:7 96.15 390 43.73 8e-105 Serine protease inhibitor (SERPIN) family protein
blastp_kegg lcl|vvi:100266122 4 385 + 382 Gaps:8 84.49 445 45.74 5e-104 serpin-ZX-like
blastp_kegg lcl|pper:PRUPE_ppa006990mg 4 383 + 380 Gaps:8 96.12 387 44.35 5e-104 hypothetical protein
blastp_kegg lcl|mdm:103440470 4 385 + 382 Gaps:7 96.65 388 45.07 6e-104 serpin-ZX-like
blastp_pdb 3le2_A 6 383 + 378 Gaps:5 96.44 393 42.22 1e-97 mol:protein length:393 Serpin-ZX
blastp_pdb 1att_B 21 384 + 364 Gaps:20 83.92 429 31.11 6e-43 mol:protein length:429 ANTITHROMBIN III
blastp_pdb 1att_A 21 384 + 364 Gaps:20 83.92 429 31.11 6e-43 mol:protein length:429 ANTITHROMBIN III
blastp_pdb 2dut_D 12 383 + 372 Gaps:23 86.76 423 28.34 8e-43 mol:protein length:423 Heterochromatin-associated protein MENT
blastp_pdb 2dut_C 12 383 + 372 Gaps:23 86.76 423 28.34 8e-43 mol:protein length:423 Heterochromatin-associated protein MENT
blastp_pdb 2dut_B 12 383 + 372 Gaps:23 86.76 423 28.34 8e-43 mol:protein length:423 Heterochromatin-associated protein MENT
blastp_pdb 2dut_A 12 383 + 372 Gaps:23 86.76 423 28.34 8e-43 mol:protein length:423 Heterochromatin-associated protein MENT
blastp_pdb 1jrr_A 12 382 + 371 Gaps:23 96.34 382 29.35 1e-41 mol:protein length:382 PLASMINOGEN ACTIVATOR INHIBITOR-2
blastp_pdb 1by7_A 12 382 + 371 Gaps:23 96.34 382 29.35 1e-41 mol:protein length:382 PROTEIN (PLASMINOGEN ACTIVATOR INHIBITOR-2)
blastp_pdb 2arr_A 12 382 + 371 Gaps:23 96.34 382 29.08 5e-41 mol:protein length:382 Plasminogen activator inhibitor-2
blastp_uniprot_sprot sp|Q9S7T8|SPZX_ARATH 6 383 + 378 Gaps:5 96.93 391 42.22 3e-97 Serpin-ZX OS Arabidopsis thaliana GN At1g47710 PE 1 SV 1
blastp_uniprot_sprot sp|Q41593|SPZ1A_WHEAT 4 384 + 381 Gaps:6 94.72 398 40.58 2e-94 Serpin-Z1A OS Triticum aestivum GN WZCI PE 1 SV 1
blastp_uniprot_sprot sp|Q40066|SPZX_HORVU 4 384 + 381 Gaps:7 95.48 398 40.00 2e-93 Serpin-ZX OS Hordeum vulgare GN PAZX PE 1 SV 1
blastp_uniprot_sprot sp|Q9ST58|SPZ1C_WHEAT 4 384 + 381 Gaps:6 94.72 398 40.05 6e-93 Serpin-Z1C OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q75H81|SPZXA_ORYSJ 4 384 + 381 Gaps:4 95.71 396 41.69 8e-92 Serpin-ZXA OS Oryza sativa subsp. japonica GN Os03g0610650 PE 1 SV 1
blastp_uniprot_sprot sp|P93693|SPZ1B_WHEAT 4 384 + 381 Gaps:5 94.74 399 39.42 3e-91 Serpin-Z1B OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q9ST57|SPZ2A_WHEAT 17 383 + 367 Gaps:3 91.96 398 41.26 9e-90 Serpin-Z2A OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|O48706|SPZ3_ARATH 6 382 + 377 Gaps:22 95.37 389 41.24 1e-89 Serpin-Z3 OS Arabidopsis thaliana GN At2g26390 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SIR9|SPZ10_ARATH 1 382 + 382 Gaps:12 97.66 385 41.49 4e-89 Serpin-Z10 OS Arabidopsis thaliana GN At2g25240 PE 2 SV 1
blastp_uniprot_sprot sp|Q10GX0|SPZXB_ORYSJ 24 384 + 361 Gaps:6 89.14 405 41.83 1e-88 Serpin-ZXB OS Oryza sativa subsp. japonica GN Os03g0610800 PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 170 276 107 G3DSA:2.30.39.10 none none none
Gene3D 335 382 48 G3DSA:2.30.39.10 none none none
SUPERFAMILY 14 382 369 SSF56574 none none IPR023796
Phobius 147 167 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 168 385 218 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 21 385 365 PTHR11461:SF52 none none none
ProSitePatterns 355 365 11 PS00284 none Serpins signature. IPR023795
Phobius 25 42 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 21 385 365 PTHR11461 none none IPR000215
Gene3D 12 169 158 G3DSA:3.30.497.10 none none none
Gene3D 277 334 58 G3DSA:3.30.497.10 none none none
Pfam 12 382 371 PF00079 none Serpin (serine protease inhibitor) IPR023796
Phobius 43 146 104 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 24 24 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 10 382 373 SM00093 none SERine Proteinase INhibitors IPR023796

1 Localization

Analysis Start End Length
TMHMM 25 42 17

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting