GO Term : GO:0003682 chromatin binding GO

Namespace  molecular_function Obsolete  false
description  Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

0 Cross References

1 Ontology

Name
GO

4 Parents

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003682 chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:0044877 macromolecular complex binding Interacting selectively and non-covalently with any macromolecular complex.

21 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0007990.2 Quercus robur 93.2 egn (M=2) K00558 - DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]   EC:2.1.1.37 validated
Qrob_P0021320.2 Quercus robur 41.4 egn (M=2) PTHR13711:SF187 - HIGH MOBILITY GROUP B PROTEIN 1 (PTHR13711:SF187)     validated
Qrob_P0044830.2 Quercus robur 90.0 egn (M=2) PTHR12505:SF19 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED (PTHR12505:SF19)     validated
Qrob_P0064650.2 Quercus robur 100.0 egn (M=2) PF01426//PF05641 - BAH domain // Agenet domain     validated
Qrob_P0125670.2 Quercus robur 100.0 egn (M=2) KOG1632//KOG1827//KOG1886 - Uncharacterized PHD Zn-finger protein [General function prediction only]. // Chromatin remodeling complex RSC subunit RSC1/Polybromo and related proteins [Chromatin structure and dynamics Transcription]. // BAH domain proteins [Transcription].   EC:1.14.11.27 validated
Qrob_P0251410.2 Quercus robur 0.0 egn (M=2) PTHR11630:SF42 - DNA REPLICATION LICENSING FACTOR MCM5   EC:3.6.4.12 validated
Qrob_P0288390.2 Quercus robur 98.1 egn (M=1) K02209 - minichromosome maintenance protein 5 (cell division control protein 46)   EC:3.6.4.12 validated
Qrob_P0345540.2 Quercus robur 100.0 egn (M=1) PTHR15141:SF38 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED (PTHR15141:SF38)     validated
Qrob_P0356050.2 Quercus robur 100.0 egn (M=1) PTHR10629:SF11 - CYTOSINE-SPECIFIC METHYLTRANSFERASE   EC:2.1.1.37 validated
Qrob_P0369300.2 Quercus robur 0.0 egn (M=1) KOG0018//KOG0933//KOG0964//KOG0979//KOG0996 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein SMC5/Spr18 SMC superfamily [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning Replication recombination and repair]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning].     validated
Qrob_P0369410.2 Quercus robur 46.4 egn (M=1) KOG0018//KOG0161//KOG0239//KOG0250//KOG0933//KOG0964//KOG0979//KOG0996 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Myosin class II heavy chain [Cytoskeleton]. // Kinesin (KAR3 subfamily) [Cytoskeleton]. // DNA repair protein RAD18 (SMC family protein) [Replication recombination and repair]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein SMC5/Spr18 SMC superfamily [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning Replication recombination and repair]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning].     validated
Qrob_P0369420.2 Quercus robur 0.0 egn (M=1) KOG0018//KOG0933//KOG0964//KOG0996 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning].     validated
Qrob_P0369440.2 Quercus robur 15.7 egn (M=5) K06636 - structural maintenance of chromosome 1     validated
Qrob_P0402930.2 Quercus robur 97.1 egn (M=1) PTHR22884//PTHR22884:SF278 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED     validated
Qrob_P0407910.2 Quercus robur 100.0 egn (M=2) PTHR13711:SF187 - HIGH MOBILITY GROUP B PROTEIN 1 (PTHR13711:SF187)     validated
Qrob_P0447970.2 Quercus robur 100.0 egn (M=2) PF01426//PF05641 - BAH domain // Agenet domain     validated
Qrob_P0460320.2 Quercus robur 99.0 egn (M=2) KOG1632//KOG1827//KOG1886 - Uncharacterized PHD Zn-finger protein [General function prediction only]. // Chromatin remodeling complex RSC subunit RSC1/Polybromo and related proteins [Chromatin structure and dynamics Transcription]. // BAH domain proteins [Transcription].     validated
Qrob_P0507960.2 Quercus robur 100.0 egn (M=1) K02603 - origin recognition complex subunit 1     validated
Qrob_P0523430.2 Quercus robur 22.3 egn (M=2) PTHR12505:SF19 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED (PTHR12505:SF19)     validated
Qrob_P0536540.2 Quercus robur 98.1 egn (M=2) PTHR15141//PTHR15141:SF39 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED     validated
Qrob_P0536550.2 Quercus robur 0.0 egn (M=1) KOG1105//KOG1886 - Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1 [Transcription]. // BAH domain proteins [Transcription].     validated

10 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0044877 GO:0003682
is_a GO:0005488 GO:0003682
is_a GO:0003674 GO:0003682
is_a GO:0003682 GO:0031490
is_a GO:0003682 GO:0031491
is_a GO:0003682 GO:0031492
is_a GO:0003682 GO:0031493
is_a GO:0003682 GO:0043035
is_a GO:0003682 GO:0097030
is_a GO:0003682 GO:1990188

3 Synonyms

Name Type
microtubule/chromatin interaction synonym
lamin/chromatin binding synonym
nuclear membrane vesicle binding to chromatin synonym