Protein : Qrob_P0064650.2 Q. robur
Protein Identifier  ? Qrob_P0064650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PF01426//PF05641 - BAH domain // Agenet domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 643  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003682 chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030410 1 641 + 641 Gaps:40 99.40 669 62.71 0.0 Agenet domain-containing protein / bromo-adjacent domain-containing protein putative isoform 1
blastp_kegg lcl|mdm:103427780 1 642 + 642 Gaps:32 98.27 637 63.26 0.0 uncharacterized LOC103427780
blastp_kegg lcl|pmum:103326954 1 632 + 632 Gaps:39 94.24 642 64.30 0.0 uncharacterized LOC103326954
blastp_kegg lcl|cit:102616727 1 637 + 637 Gaps:12 97.42 660 60.50 0.0 uncharacterized LOC102616727
blastp_kegg lcl|cic:CICLE_v10014507mg 1 637 + 637 Gaps:12 96.26 668 60.19 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s01840g 1 624 + 624 Gaps:15 90.23 686 61.23 0.0 POPTRDRAFT_867289 hypothetical protein
blastp_kegg lcl|fve:101315321 1 633 + 633 Gaps:20 94.62 650 61.79 0.0 uncharacterized protein LOC101315321
blastp_kegg lcl|pxb:103963744 1 615 + 615 Gaps:27 100.00 598 63.55 0.0 uncharacterized LOC103963744
blastp_kegg lcl|pxb:103931803 1 637 + 637 Gaps:82 97.25 690 58.87 0.0 uncharacterized LOC103931803
blastp_kegg lcl|pop:POPTR_0016s00930g 1 624 + 624 Gaps:27 90.36 685 60.26 0.0 POPTRDRAFT_905369 hypothetical protein
rpsblast_cdd gnl|CDD|72861 158 285 + 128 Gaps:4 100.00 130 53.85 2e-40 cd04721 BAH_plant_1 BAH or Bromo Adjacent Homology domain plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72854 180 269 + 90 Gaps:1 73.55 121 23.60 5e-09 cd04714 BAH_BAHCC1 BAH or Bromo Adjacent Homology domain as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72847 162 269 + 108 Gaps:10 91.06 123 27.68 3e-08 cd04370 BAH BAH or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in mammalian DNA methyltransferases and the MTA1 subunits of histone deacetylase complexes. A BAH domain is also found in Yeast Sir3p and in the origin receptor complex protein 1 (Orc1p) where it was found to interact with the N-terminal lobe of the silence information regulator 1 protein (Sir1p) confirming the initial hypothesis that BAH plays a role in protein-protein interactions..
rpsblast_cdd gnl|CDD|201789 164 265 + 102 Gaps:4 86.67 120 28.85 6e-08 pfam01426 BAH BAH domain. This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction.
rpsblast_cdd gnl|CDD|197726 164 243 + 80 Gaps:6 69.42 121 32.14 5e-07 smart00439 BAH Bromo adjacent homology domain.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 387 452 66 SM00743 none Tudor-like domain present in plant sequences. IPR014002
SMART 473 531 59 SM00743 none Tudor-like domain present in plant sequences. IPR014002
Pfam 164 252 89 PF01426 none BAH domain IPR001025
Pfam 389 469 81 PF05641 none Agenet domain IPR008395
PANTHER 4 562 559 PTHR31917 none none none
PANTHER 4 562 559 PTHR31917:SF6 none none none
SMART 163 280 118 SM00439 none Bromo adjacent homology domain IPR001025
ProSiteProfiles 157 280 124 PS51038 none BAH domain profile. IPR001025

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting