Protein : Qrob_P0447970.2 Q. robur
Protein Identifier  ? Qrob_P0447970.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PF01426//PF05641 - BAH domain // Agenet domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 687  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003682 chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103342734 1 686 + 686 Gaps:27 100.00 687 67.10 0.0 uncharacterized LOC103342734
blastp_kegg lcl|rcu:RCOM_0521230 1 686 + 686 Gaps:15 100.00 683 65.15 0.0 DNA binding protein putative
blastp_kegg lcl|pxb:103965447 1 654 + 654 Gaps:37 85.51 773 68.08 0.0 uncharacterized LOC103965447
blastp_kegg lcl|mdm:103448313 1 631 + 631 Gaps:19 82.34 753 70.00 0.0 uncharacterized LOC103448313
blastp_kegg lcl|cit:102614334 1 661 + 661 Gaps:9 96.92 681 65.30 0.0 uncharacterized LOC102614334
blastp_kegg lcl|tcc:TCM_030669 1 686 + 686 Gaps:18 99.71 698 61.93 0.0 Agenet domain-containing protein / bromo-adjacent domain-containing protein putative
blastp_kegg lcl|vvi:100265203 1 686 + 686 Gaps:38 100.00 688 63.81 0.0 uncharacterized LOC100265203
blastp_kegg lcl|mdm:103427758 1 654 + 654 Gaps:44 85.38 773 65.15 0.0 uncharacterized LOC103427758
blastp_kegg lcl|fve:101292962 1 686 + 686 Gaps:39 100.00 657 64.84 0.0 uncharacterized protein LOC101292962
blastp_kegg lcl|pvu:PHAVU_006G055500g 1 685 + 685 Gaps:25 96.87 702 59.71 0.0 hypothetical protein
rpsblast_cdd gnl|CDD|72861 163 292 + 130 none 100.00 130 50.77 1e-50 cd04721 BAH_plant_1 BAH or Bromo Adjacent Homology domain plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72854 169 280 + 112 Gaps:4 92.56 121 25.89 1e-09 cd04714 BAH_BAHCC1 BAH or Bromo Adjacent Homology domain as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|191330 397 476 + 80 Gaps:18 100.00 66 36.36 2e-07 pfam05641 Agenet Agenet domain. This domain is related to the TUDOR domain pfam00567. The function of the agenet domain is unknown. This family currently only matches one of the two Agenet domains in the FMR proteins.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 168 287 120 PS51038 none BAH domain profile. IPR001025
Pfam 169 275 107 PF01426 none BAH domain IPR001025
Pfam 397 477 81 PF05641 none Agenet domain IPR008395
PANTHER 3 577 575 PTHR31917 none none none
PANTHER 3 577 575 PTHR31917:SF6 none none none
SMART 481 539 59 SM00743 none Tudor-like domain present in plant sequences. IPR014002
SMART 395 460 66 SM00743 none Tudor-like domain present in plant sequences. IPR014002
SMART 168 287 120 SM00439 none Bromo adjacent homology domain IPR001025

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting