Protein : Qrob_P0356050.2 Q. robur
Protein Identifier  ? Qrob_P0356050.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10629:SF11 - CYTOSINE-SPECIFIC METHYLTRANSFERASE Code Enzyme  EC:2.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1578  
Kegg Orthology  K00558
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003682 chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0006306 DNA methylation The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_001643 35 1575 + 1541 Gaps:8 99.68 1546 77.68 0.0 DNA-methyltransferase family protein
blastp_kegg lcl|rcu:RCOM_1176970 37 1574 + 1538 Gaps:18 99.61 1542 76.30 0.0 DNA (cytosine-5)-methyltransferase putative (EC:2.3.1.97)
blastp_kegg lcl|pmum:103340319 21 1575 + 1555 Gaps:31 98.27 1563 77.28 0.0 DNA (cytosine-5)-methyltransferase 1-like
blastp_kegg lcl|vvi:100251127 1 1575 + 1575 Gaps:39 99.81 1549 78.07 0.0 DNA (cytosine-5)-methyltransferase 1B-like
blastp_kegg lcl|cit:102616428 1 1575 + 1575 Gaps:27 99.87 1558 75.39 0.0 DNA (cytosine-5)-methyltransferase 1-like
blastp_kegg lcl|pop:POPTR_0004s14140g 67 1577 + 1511 Gaps:16 98.69 1529 75.94 0.0 POPTRDRAFT_800689 DNA (cytosine-5)-methyltransferase AthI family protein
blastp_kegg lcl|pper:PRUPE_ppa000190mg 75 1575 + 1501 Gaps:24 99.66 1492 78.14 0.0 hypothetical protein
blastp_kegg lcl|vvi:100240896 41 1571 + 1531 Gaps:10 99.80 1530 74.98 0.0 DNA (cytosine-5)-methyltransferase 1B-like
blastp_kegg lcl|pxb:103950162 21 1574 + 1554 Gaps:17 98.47 1573 74.63 0.0 DNA (cytosine-5)-methyltransferase 1-like
blastp_kegg lcl|pop:POPTR_0019s00240g 35 1577 + 1543 Gaps:48 99.81 1576 73.30 0.0 POPTRDRAFT_809445 DNA (cytosine-5)-methyltransferase AthI family protein
blastp_pdb 3pta_A 756 1574 + 819 Gaps:134 90.90 956 37.74 3e-171 mol:protein length:956 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3swr_A 756 1574 + 819 Gaps:134 86.73 1002 37.74 9e-171 mol:protein length:1002 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 4da4_B 756 1568 + 813 Gaps:133 98.74 873 37.47 8e-168 mol:protein length:873 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 4da4_A 756 1568 + 813 Gaps:133 98.74 873 37.47 8e-168 mol:protein length:873 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3pt9_A 756 1568 + 813 Gaps:133 98.74 873 37.47 8e-168 mol:protein length:873 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3pt6_B 756 1568 + 813 Gaps:133 90.36 954 37.70 2e-166 mol:protein length:954 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3pt6_A 756 1568 + 813 Gaps:133 90.36 954 37.70 2e-166 mol:protein length:954 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3av6_A 756 1568 + 813 Gaps:133 64.81 1330 37.70 2e-163 mol:protein length:1330 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3av5_A 756 1568 + 813 Gaps:133 64.81 1330 37.70 2e-163 mol:protein length:1330 DNA (cytosine-5)-methyltransferase 1
blastp_pdb 3av4_A 756 1568 + 813 Gaps:133 64.81 1330 37.70 2e-163 mol:protein length:1330 DNA (cytosine-5)-methyltransferase 1
blastp_uniprot_sprot sp|P34881|DNMT1_ARATH 58 1575 + 1518 Gaps:27 98.89 1534 64.01 0.0 DNA (cytosine-5)-methyltransferase 1 OS Arabidopsis thaliana GN DMT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7Y1I7|DNM1A_ORYSJ 29 1575 + 1547 Gaps:54 99.61 1527 60.95 0.0 DNA (cytosine-5)-methyltransferase 1A OS Oryza sativa subsp. japonica GN MET1A PE 2 SV 1
blastp_uniprot_sprot sp|B1Q3J6|DNM1B_ORYSJ 29 1575 + 1547 Gaps:49 99.54 1529 61.50 0.0 DNA (cytosine-5)-methyltransferase 1B OS Oryza sativa subsp. japonica GN MET1B PE 2 SV 1
blastp_uniprot_sprot sp|Q24K09|DNMT1_BOVIN 756 1574 + 819 Gaps:131 53.88 1611 38.25 4e-168 DNA (cytosine-5)-methyltransferase 1 OS Bos taurus GN DNMT1 PE 2 SV 1
blastp_uniprot_sprot sp|P26358|DNMT1_HUMAN 756 1568 + 813 Gaps:134 53.40 1616 37.89 8e-166 DNA (cytosine-5)-methyltransferase 1 OS Homo sapiens GN DNMT1 PE 1 SV 2
blastp_uniprot_sprot sp|P13864|DNMT1_MOUSE 756 1568 + 813 Gaps:133 53.21 1620 37.70 1e-161 DNA (cytosine-5)-methyltransferase 1 OS Mus musculus GN Dnmt1 PE 1 SV 5
blastp_uniprot_sprot sp|Q27746|DNMT1_PARLI 715 1574 + 860 Gaps:127 56.76 1612 36.50 1e-157 DNA (cytosine-5)-methyltransferase PliMCI OS Paracentrotus lividus GN DNMT PE 2 SV 1
blastp_uniprot_sprot sp|Q92072|DNMT1_CHICK 756 1574 + 819 Gaps:124 56.67 1537 36.28 2e-157 DNA (cytosine-5)-methyltransferase 1 OS Gallus gallus GN DNMT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Z330|DNMT1_RAT 507 1568 + 1062 Gaps:192 69.91 1622 32.72 1e-146 DNA (cytosine-5)-methyltransferase 1 OS Rattus norvegicus GN Dnmt1 PE 1 SV 2
blastp_uniprot_sprot sp|Q94F87|CMT2_ARATH 1230 1570 + 341 Gaps:38 28.19 1295 37.81 1e-59 DNA (cytosine-5)-methyltransferase CMT2 OS Arabidopsis thaliana GN CMT2 PE 2 SV 3

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 506 1577 1072 PTHR10629 none none none
PANTHER 223 490 268 PTHR10629 none none none
ProSiteProfiles 1140 1574 435 PS51679 "KEGG:00270+2.1.1.37" C-5 cytosine-specific DNA methylase (Dnmt) domain profile. IPR001525
Pfam 430 583 154 PF12047 "KEGG:00270+2.1.1.37" Cytosine specific DNA methyltransferase replication foci domain IPR022702
Pfam 122 257 136 PF12047 "KEGG:00270+2.1.1.37" Cytosine specific DNA methyltransferase replication foci domain IPR022702
PANTHER 506 1577 1072 PTHR10629:SF11 none none none
PANTHER 223 490 268 PTHR10629:SF11 none none none
Pfam 956 1094 139 PF01426 none BAH domain IPR001025
Pfam 783 915 133 PF01426 none BAH domain IPR001025
TIGRFAM 1143 1566 424 TIGR00675 "KEGG:00270+2.1.1.37" dcm: DNA (cytosine-5-)-methyltransferase IPR001525
ProSitePatterns 1237 1249 13 PS00094 "KEGG:00270+2.1.1.37" C-5 cytosine-specific DNA methylases active site. IPR018117
ProSiteProfiles 781 915 135 PS51038 none BAH domain profile. IPR001025
Coils 707 728 22 Coil none none none
SMART 955 1094 140 SM00439 none Bromo adjacent homology domain IPR001025
SMART 781 915 135 SM00439 none Bromo adjacent homology domain IPR001025
SUPERFAMILY 1233 1568 336 SSF53335 none none IPR029063
SUPERFAMILY 1142 1200 59 SSF53335 none none IPR029063
ProSiteProfiles 955 1094 140 PS51038 none BAH domain profile. IPR001025
ProSitePatterns 1549 1567 19 PS00095 "KEGG:00270+2.1.1.37" C-5 cytosine-specific DNA methylases C-terminal signature. IPR018117
PRINTS 1278 1292 15 PR00105 "KEGG:00270+2.1.1.37" Cytosine-specific DNA methyltransferase signature IPR001525
PRINTS 1141 1157 17 PR00105 "KEGG:00270+2.1.1.37" Cytosine-specific DNA methyltransferase signature IPR001525
PRINTS 1324 1337 14 PR00105 "KEGG:00270+2.1.1.37" Cytosine-specific DNA methyltransferase signature IPR001525
Gene3D 1234 1416 183 G3DSA:3.40.50.150 none none IPR029063
Gene3D 1136 1200 65 G3DSA:3.40.50.150 none none IPR029063
Pfam 1227 1568 342 PF00145 none C-5 cytosine-specific DNA methylase none
Gene3D 1517 1555 39 G3DSA:3.90.120.10 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting