GO Term : GO:0006511 ubiquitin-dependent protein catabolic process GO

Namespace  biological_process Obsolete  false
description  The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.

0 Cross References

1 Ontology

Name
GO

22 Parents

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0051603 proteolysis involved in cellular protein catabolic process The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0019538 protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0009056 catabolic process The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.
GO:1901575 organic substance catabolic process The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.
GO:0044248 cellular catabolic process The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
GO:0044267 cellular protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO:0009057 macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0044265 cellular macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells.
GO:0044257 cellular protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
GO:0019941 modification-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent modification of the target protein.
GO:0043632 modification-dependent macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, initiated by covalent modification of the target molecule.

65 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0006070.2 Quercus robur 0.0 egn (M=1) KOG2166//KOG2167//KOG2285 - Cullins [Cell cycle control cell division chromosome partitioning]. // Cullins [Cell cycle control cell division chromosome partitioning]. // E3 ubiquitin ligase Cullin 1 component [Posttranslational modification protein turnover chaperones].     validated
Qrob_P0018860.2 Quercus robur 100.0 egn (M=1) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.1.2.15]   EC:3.4.19.12 validated
Qrob_P0020830.2 Quercus robur 100.0 egn (M=1) KOG0944//KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1871//KOG1873 - Ubiquitin-specific protease UBP14 [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].   EC:3.4.19.12 validated
Qrob_P0024220.2 Quercus robur 100.0 egn (M=5) K04506 - E3 ubiquitin-protein ligase SIAH1 [EC:6.3.2.19]   EC:6.3.2.19 validated
Qrob_P0031450.2 Quercus robur 14.0 egn (M=8) K03094 - S-phase kinase-associated protein 1     validated
Qrob_P0070980.2 Quercus robur 100.0 egn (M=2) KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1871//KOG1873//KOG4598 - Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].   EC:3.4.19.12 validated
Qrob_P0072840.2 Quercus robur 96.1 egn (M=2) K11836 - ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]   EC:3.4.19.12 validated
Qrob_P0072860.2 Quercus robur 100.0 egn (M=2) K11836 - ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]   EC:3.4.19.12 validated
Qrob_P0086780.2 Quercus robur 92.0 egn (M=2) PTHR10315//PTHR10315:SF24 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED   EC:6.3.2.19 validated
Qrob_P0086790.2 Quercus robur 82.0 egn (M=2) PTHR10315//PTHR10315:SF24 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED   EC:3.1.3.16 validated
Qrob_P0089550.2 Quercus robur 51.1 egn (M=1) KOG0652//KOG0726//KOG0727//KOG0728//KOG0729//KOG1356//KOG2884//KOG3043 - 26S proteasome regulatory complex ATPase RPT5 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT2 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT3 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT6 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT1 [Posttranslational modification protein turnover chaperones]. // Putative transcription factor 5qNCA contains JmjC domain [Transcription]. // 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones]. // Predicted hydrolase related to dienelactone hydrolase [General function prediction only].     validated
Qrob_P0104890.2 Quercus robur 99.3 egn (M=1) K02729 - 20S proteasome subunit alpha 5 [EC:3.4.25.1]   EC:3.4.25.1 validated
Qrob_P0126480.2 Quercus robur 98.0 egn (M=2) KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1871//KOG1873//KOG4598 - Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].   EC:3.4.19.12 validated
Qrob_P0152980.2 Quercus robur 100.1 egn (M=2) PTHR11165//PTHR11165:SF57 - SKP1 // SUBFAMILY NOT NAMED     validated
Qrob_P0155940.2 Quercus robur 99.1 egn (M=2) PTHR24006:SF364 - AT02704P-RELATED (PTHR24006:SF364)   EC:3.4.19.12 validated
Qrob_P0202280.2 Quercus robur 77.1 egn (M=1) K03349 - anaphase-promoting complex subunit 2     validated
Qrob_P0204070.2 Quercus robur 97.0 egn (M=1) KOG0944//KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1873//KOG4598 - Ubiquitin-specific protease UBP14 [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].   EC:3.4.19.12 validated
Qrob_P0222530.2 Quercus robur 20.0 egn (M=4) K11835 - ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]   EC:3.4.19.12 validated
Qrob_P0246640.2 Quercus robur 94.5 egn (M=4) K03869 - cullin 3     validated
Qrob_P0248440.2 Quercus robur 88.1 egn (M=3) K14016 - ubiquitin fusion degradation protein 1     validated
Qrob_P0265660.2 Quercus robur 97.0 egn (M=1) KOG0944//KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1987//KOG4598 - Ubiquitin-specific protease UBP14 [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Speckle-type POZ protein SPOP and related proteins with TRAF MATH and BTB/POZ domains [Cell cycle control cell division chromosome partitioning General function prediction only]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].   EC:3.4.19.12 validated
Qrob_P0275990.2 Quercus robur 0.0 egn (M=3) K14016 - ubiquitin fusion degradation protein 1     validated
Qrob_P0283680.2 Quercus robur 100.0 egn (M=8) K03094 - S-phase kinase-associated protein 1     validated
Qrob_P0292030.2 Quercus robur 100.0 egn (M=3) K14016 - ubiquitin fusion degradation protein 1     validated
Qrob_P0337010.2 Quercus robur 100.0 egn (M=5) K04506 - E3 ubiquitin-protein ligase SIAH1 [EC:6.3.2.19]   EC:6.3.2.19 validated
Qrob_P0346340.2 Quercus robur 100.0 egn (M=3) K03029 - 26S proteasome regulatory subunit N10     validated
Qrob_P0354530.2 Quercus robur 55.3 egn (M=2) K12847 - U4/U6.U5 tri-snRNP-associated protein 2   EC:3.4.19.12 validated
Qrob_P0365250.2 Quercus robur 0.0 egn (M=1) KOG2166//KOG2167//KOG2284//KOG2285 - Cullins [Cell cycle control cell division chromosome partitioning]. // Cullins [Cell cycle control cell division chromosome partitioning]. // E3 ubiquitin ligase Cullin 2 component [Posttranslational modification protein turnover chaperones]. // E3 ubiquitin ligase Cullin 1 component [Posttranslational modification protein turnover chaperones].     validated
Qrob_P0365260.2 Quercus robur 100.0 egn (M=4) K03869 - cullin 3     validated
Qrob_P0387080.2 Quercus robur 100.0 egn (M=1) K02731 - 20S proteasome subunit alpha 4 [EC:3.4.25.1]   EC:3.4.25.1 validated

125 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0019941 GO:0006511
is_a GO:0044237 GO:0006511
is_a GO:0044238 GO:0006511
is_a GO:0051603 GO:0006511
part of GO:0009056 GO:0006511
part of GO:0009057 GO:0006511
part of GO:1901575 GO:0006511
part of GO:0009987 GO:0006511
is_a GO:0009987 GO:0006511
part of GO:0044260 GO:0006511
is_a GO:0009056 GO:0006511
part of GO:0008152 GO:0006511
part of GO:0008150 GO:0006511
is_a GO:0009057 GO:0006511
part of GO:0044265 GO:0006511
part of GO:0044257 GO:0006511
part of GO:0030163 GO:0006511
part of GO:0044237 GO:0006511
part of GO:0071704 GO:0006511
part of GO:0044238 GO:0006511
is_a GO:0008152 GO:0006511
is_a GO:1901575 GO:0006511
is_a GO:0071704 GO:0006511
is_a GO:0008150 GO:0006511
is_a GO:0043632 GO:0006511
is_a GO:0044265 GO:0006511
is_a GO:0044248 GO:0006511
is_a GO:0019538 GO:0006511
is_a GO:0044260 GO:0006511
part of GO:0043170 GO:0006511

4 Synonyms

Name Type
ubiquitin-dependent proteolysis synonym
ubiquitin-dependent protein degradation synonym
ubiquitin-dependent protein catabolism synonym
ubiquitin-dependent protein breakdown synonym