Protein : Qrob_P0204070.2 Q. robur
Protein Identifier  ? Qrob_P0204070.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) KOG0944//KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1873//KOG4598 - Ubiquitin-specific protease UBP14 [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 955  
Kegg Orthology  K11855
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_000999 1 954 + 954 Gaps:113 100.00 941 57.81 0.0 Ubiquitin-specific protease 17 putative isoform 1
blastp_kegg lcl|vvi:100853437 5 954 + 950 Gaps:129 99.89 942 56.85 0.0 ubiquitin carboxyl-terminal hydrolase 17-like
blastp_kegg lcl|pper:PRUPE_ppa001429mg 22 911 + 890 Gaps:137 97.71 830 63.01 0.0 hypothetical protein
blastp_kegg lcl|pmum:103334293 1 911 + 911 Gaps:144 99.88 826 62.55 0.0 ubiquitin carboxyl-terminal hydrolase 17
blastp_kegg lcl|mdm:103422928 1 898 + 898 Gaps:131 98.33 839 61.33 0.0 ubiquitin carboxyl-terminal hydrolase 17-like
blastp_kegg lcl|cit:102607676 1 954 + 954 Gaps:126 100.00 904 56.97 0.0 ubiquitin carboxyl-terminal hydrolase 16-like
blastp_kegg lcl|mdm:103448199 1 898 + 898 Gaps:131 98.33 839 61.21 0.0 ubiquitin carboxyl-terminal hydrolase 17
blastp_kegg lcl|pxb:103933059 1 898 + 898 Gaps:131 98.33 839 61.33 0.0 ubiquitin carboxyl-terminal hydrolase 17
blastp_kegg lcl|fve:101309978 1 911 + 911 Gaps:150 99.88 860 57.86 0.0 ubiquitin carboxyl-terminal hydrolase 16-like
blastp_kegg lcl|pvu:PHAVU_002G148100g 1 954 + 954 Gaps:137 100.00 925 55.03 0.0 hypothetical protein
blastp_pdb 3mhs_A 452 762 + 311 Gaps:48 69.54 476 31.72 1e-31 mol:protein length:476 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3mhh_A 452 762 + 311 Gaps:48 69.54 476 31.72 1e-31 mol:protein length:476 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3m99_A 452 762 + 311 Gaps:48 70.28 471 31.72 2e-31 mol:protein length:471 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 2y6e_F 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_E 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_D 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_C 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_B 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_A 452 762 + 311 Gaps:54 95.10 367 27.22 1e-27 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 3n3k_A 452 760 + 309 Gaps:35 83.33 396 28.18 2e-26 mol:protein length:396 Ubiquitin carboxyl-terminal hydrolase 8
blastp_uniprot_sprot sp|Q9FKP5|UBP17_ARATH 17 850 + 834 Gaps:29 77.84 731 60.81 4e-173 Ubiquitin carboxyl-terminal hydrolase 17 OS Arabidopsis thaliana GN UBP17 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SB51|UBP16_ARATH 19 845 + 827 Gaps:67 63.10 1008 51.73 6e-141 Ubiquitin carboxyl-terminal hydrolase 16 OS Arabidopsis thaliana GN UBP16 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FPS9|UBP15_ARATH 42 840 + 799 Gaps:13 53.57 924 49.09 2e-123 Ubiquitin carboxyl-terminal hydrolase 15 OS Arabidopsis thaliana GN UBP15 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SJA1|UBP19_ARATH 395 775 + 381 Gaps:25 53.87 672 53.87 3e-123 Ubiquitin carboxyl-terminal hydrolase 19 OS Arabidopsis thaliana GN UBP19 PE 2 SV 2
blastp_uniprot_sprot sp|Q67XW5|UBP18_ARATH 429 765 + 337 Gaps:11 52.61 631 53.92 2e-119 Ubiquitin carboxyl-terminal hydrolase 18 OS Arabidopsis thaliana GN UBP18 PE 2 SV 2
blastp_uniprot_sprot sp|D3ZU96|UBP42_RAT 429 763 + 335 Gaps:16 24.38 1325 41.18 1e-69 Ubiquitin carboxyl-terminal hydrolase 42 OS Rattus norvegicus GN Usp42 PE 3 SV 1
blastp_uniprot_sprot sp|B2RQC2|UBP42_MOUSE 429 763 + 335 Gaps:16 24.40 1324 41.18 2e-69 Ubiquitin carboxyl-terminal hydrolase 42 OS Mus musculus GN Usp42 PE 2 SV 1
blastp_uniprot_sprot sp|E1B9W9|UBP42_BOVIN 429 763 + 335 Gaps:18 24.23 1333 40.87 3e-69 Ubiquitin carboxyl-terminal hydrolase 42 OS Bos taurus GN USP42 PE 3 SV 1
blastp_uniprot_sprot sp|Q9H9J4|UBP42_HUMAN 429 763 + 335 Gaps:18 24.40 1324 40.87 4e-69 Ubiquitin carboxyl-terminal hydrolase 42 OS Homo sapiens GN USP42 PE 1 SV 3
blastp_uniprot_sprot sp|Q9P275|UBP36_HUMAN 429 761 + 333 Gaps:14 28.64 1121 39.56 3e-67 Ubiquitin carboxyl-terminal hydrolase 36 OS Homo sapiens GN USP36 PE 1 SV 3

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 877 882 6 PTHR24006 none none none
SUPERFAMILY 68 110 43 SSF144232 none none none
PANTHER 447 766 320 PTHR24006:SF358 none none none
PANTHER 877 882 6 PTHR24006:SF358 none none none
ProSitePatterns 452 467 16 PS00972 none Ubiquitin specific protease (USP) domain signature 1. IPR018200
Gene3D 583 655 73 G3DSA:2.20.210.10 none none none
ProSiteProfiles 71 108 38 PS50865 none Zinc finger MYND-type profile. IPR002893
Pfam 450 759 310 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394
Phobius 6 24 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 450 761 312 SSF54001 none none none
PANTHER 30 171 142 PTHR24006:SF358 none none none
Phobius 25 954 930 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 451 762 312 PS50235 none Ubiquitin specific protease (USP) domain profile. IPR028889
Pfam 71 108 38 PF01753 none MYND finger IPR002893
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 30 171 142 PTHR24006 none none none
PANTHER 447 766 320 PTHR24006 none none none

1 Localization

Analysis Start End Length
TMHMM 2 24 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Secretory pathway 1 0.962 0.009 NON-PLANT 33