Protein : Qrob_P0152980.2 Q. robur
Protein Identifier  ? Qrob_P0152980.2 Organism . Name  Quercus robur
Score  100.1 Score Type  egn
Protein Description  (M=2) PTHR11165//PTHR11165:SF57 - SKP1 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 428  
Kegg Orthology  K03094
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100247347 51 406 + 356 Gaps:9 99.44 359 83.75 0.0 SKP1-like protein 21-like
blastp_kegg lcl|mdm:103442892 51 399 + 349 Gaps:8 98.87 355 84.62 0.0 SKP1-like protein 21
blastp_kegg lcl|pxb:103932224 51 399 + 349 Gaps:8 98.87 355 83.76 0.0 SKP1-like protein 21
blastp_kegg lcl|pxb:103934910 51 399 + 349 Gaps:8 95.64 367 83.19 0.0 SKP1-like protein 21
blastp_kegg lcl|csv:101230972 51 401 + 351 Gaps:9 83.76 425 82.30 0.0 SKP1-like protein 21-like
blastp_kegg lcl|csv:101213448 51 401 + 351 Gaps:9 83.76 425 82.30 0.0 SKP1-like protein 21-like
blastp_kegg lcl|cmo:103482906 51 398 + 348 Gaps:10 95.68 370 82.49 0.0 SKP1-like protein 21
blastp_kegg lcl|cit:102620512 51 399 + 349 Gaps:6 98.88 357 82.72 0.0 SKP1-like protein 21-like
blastp_kegg lcl|cic:CICLE_v10005270mg 51 399 + 349 Gaps:6 98.88 357 82.44 3e-180 hypothetical protein
blastp_kegg lcl|tcc:TCM_015202 51 398 + 348 Gaps:6 98.60 357 82.67 5e-179 SKP1-like protein 21 isoform 1
blastp_pdb 2e32_D 61 203 + 143 Gaps:13 91.57 166 37.50 2e-18 mol:protein length:166 S-phase kinase-associated protein 1A
blastp_pdb 2e32_B 61 203 + 143 Gaps:13 91.57 166 37.50 2e-18 mol:protein length:166 S-phase kinase-associated protein 1A
blastp_pdb 2e31_B 61 203 + 143 Gaps:13 91.57 166 37.50 2e-18 mol:protein length:166 S-phase kinase-associated protein 1A
blastp_pdb 2ast_A 65 203 + 139 Gaps:12 93.71 159 36.24 4e-18 mol:protein length:159 S-phase kinase-associated protein 1A
blastp_pdb 2ass_A 65 203 + 139 Gaps:12 93.71 159 36.24 4e-18 mol:protein length:159 S-phase kinase-associated protein 1A
blastp_pdb 3l2o_A 65 203 + 139 Gaps:8 90.60 149 39.26 5e-18 mol:protein length:149 S-phase kinase-associated protein 1
blastp_pdb 2ovr_A 67 203 + 137 Gaps:8 89.26 149 39.85 6e-18 mol:protein length:149 S-phase kinase-associated protein 1A
blastp_pdb 2ovq_A 67 203 + 137 Gaps:8 89.26 149 39.85 6e-18 mol:protein length:149 S-phase kinase-associated protein 1A
blastp_pdb 2ovp_A 67 203 + 137 Gaps:8 89.26 149 39.85 6e-18 mol:protein length:149 S-phase kinase-associated protein 1A
blastp_pdb 1fqv_P 67 203 + 137 Gaps:8 89.26 149 39.85 6e-18 mol:protein length:149 SKP1
blastp_uniprot_sprot sp|Q8LF97|ASK21_ARATH 51 403 + 353 Gaps:13 98.58 351 69.65 1e-152 SKP1-like protein 21 OS Arabidopsis thaliana GN ASK21 PE 2 SV 1
blastp_uniprot_sprot sp|A8MQG7|ASK20_ARATH 51 413 + 363 Gaps:26 98.58 352 68.01 2e-139 SKP1-like protein 20 OS Arabidopsis thaliana GN ASK20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSX9|ASK9_ARATH 67 203 + 137 Gaps:7 88.89 153 37.50 5e-19 SKP1-like protein 9 OS Arabidopsis thaliana GN ASK9 PE 1 SV 1
blastp_uniprot_sprot sp|P52285|SKP1A_DICDI 65 203 + 139 Gaps:14 89.51 162 36.55 8e-18 SCF ubiquitin ligase complex protein SKP1a OS Dictyostelium discoideum GN fpaA PE 1 SV 1
blastp_uniprot_sprot sp|Q71U00|SKP1_XENLA 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Xenopus laevis GN skp1 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R512|SKP1_PONAB 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Pongo abelii GN SKP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4R5B9|SKP1_MACFA 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Macaca fascicularis GN SKP1 PE 2 SV 1
blastp_uniprot_sprot sp|P63208|SKP1_HUMAN 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Homo sapiens GN SKP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5ZKF5|SKP1_CHICK 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Gallus gallus GN SKP1 PE 2 SV 1
blastp_uniprot_sprot sp|P63209|SKP1_CAVPO 67 203 + 137 Gaps:12 90.18 163 36.73 2e-17 S-phase kinase-associated protein 1 OS Cavia porcellus GN SKP1 PE 2 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 66 129 64 PF03931 "Reactome:REACT_6185","UniPathway:UPA00143" Skp1 family, tetramerisation domain IPR016073
SUPERFAMILY 65 129 65 SSF54695 none none IPR011333
Coils 219 240 22 Coil none none none
SMART 64 165 102 SM00512 "Reactome:REACT_6185","UniPathway:UPA00143" Found in Skp1 protein family IPR001232
PANTHER 57 223 167 PTHR11165:SF57 none none none
Pfam 139 208 70 PF01466 "UniPathway:UPA00143" Skp1 family, dimerisation domain IPR016072
PANTHER 57 223 167 PTHR11165 none none none
Gene3D 64 205 142 G3DSA:3.30.710.10 none none none
SUPERFAMILY 140 207 68 SSF81382 "UniPathway:UPA00143" none IPR016072

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Mitochondrion 4 0.084 0.583 NON-PLANT 33