Protein : Qrob_P0365260.2 Q. robur
Protein Identifier  ? Qrob_P0365260.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K03869 - cullin 3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 735  
Kegg Orthology  K03869
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
GO:0031461 cullin-RING ubiquitin ligase complex Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa001982mg 1 734 + 734 Gaps:1 100.00 733 90.31 0.0 hypothetical protein
blastp_kegg lcl|cit:102630361 1 734 + 734 Gaps:1 100.00 733 89.50 0.0 cullin-3B-like
blastp_kegg lcl|cmo:103487010 1 734 + 734 Gaps:1 100.00 733 88.95 0.0 cullin-3A-like
blastp_kegg lcl|pxb:103933074 1 734 + 734 Gaps:1 100.00 733 88.95 0.0 cullin-3A-like
blastp_kegg lcl|mdm:103404435 1 734 + 734 Gaps:1 100.00 733 89.36 0.0 cullin-3A-like
blastp_kegg lcl|csv:101204239 1 734 + 734 Gaps:1 100.00 733 88.81 0.0 cullin-3A-like
blastp_kegg lcl|cic:CICLE_v10011157mg 1 734 + 734 Gaps:1 100.00 733 89.22 0.0 hypothetical protein
blastp_kegg lcl|mdm:103442346 1 734 + 734 Gaps:1 100.00 733 88.68 0.0 cullin-3B-like
blastp_kegg lcl|vvi:100254227 1 734 + 734 Gaps:1 100.00 733 88.81 0.0 cullin-3B-like
blastp_kegg lcl|mdm:103411193 1 734 + 734 Gaps:1 100.00 733 88.68 0.0 cullin-3B-like
blastp_pdb 4a0k_A 7 734 + 728 Gaps:19 96.90 742 40.61 2e-172 mol:protein length:742 CULLIN-4A
blastp_pdb 2hye_C 7 734 + 728 Gaps:19 94.73 759 40.61 8e-172 mol:protein length:759 Cullin-4A
blastp_pdb 4a0l_H 7 734 + 728 Gaps:19 99.04 726 41.59 6e-170 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 7 734 + 728 Gaps:19 99.04 726 41.59 6e-170 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0c_E 7 734 + 728 Gaps:19 97.03 741 41.59 7e-170 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 7 734 + 728 Gaps:19 97.03 741 41.59 7e-170 mol:protein length:741 CULLIN-4B
blastp_pdb 1ldj_A 26 734 + 709 Gaps:70 99.87 760 32.94 2e-119 mol:protein length:760 Cullin homolog 1
blastp_pdb 1u6g_A 26 734 + 709 Gaps:70 97.81 776 32.94 3e-119 mol:protein length:776 Cullin homolog 1
blastp_pdb 4ap2_B 2 381 + 380 Gaps:7 92.93 410 47.77 1e-110 mol:protein length:410 CULLIN-3
blastp_pdb 4apf_B 20 381 + 362 Gaps:5 94.07 388 48.77 2e-110 mol:protein length:388 CULLIN 3
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 1 734 + 734 Gaps:2 100.00 732 79.92 0.0 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9L0|CUL3B_ARATH 1 734 + 734 Gaps:2 100.00 732 79.78 0.0 Cullin-3B OS Arabidopsis thaliana GN CUL3B PE 1 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 7 734 + 728 Gaps:44 98.57 769 53.03 0.0 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q13618|CUL3_HUMAN 2 734 + 733 Gaps:37 98.96 768 52.50 0.0 Cullin-3 OS Homo sapiens GN CUL3 PE 1 SV 2
blastp_uniprot_sprot sp|B5DF89|CUL3_RAT 2 734 + 733 Gaps:41 98.96 768 52.89 0.0 Cullin-3 OS Rattus norvegicus GN Cul3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JLV5|CUL3_MOUSE 2 734 + 733 Gaps:41 98.96 768 52.76 0.0 Cullin-3 OS Mus musculus GN Cul3 PE 1 SV 1
blastp_uniprot_sprot sp|Q6DE95|CUL3A_XENLA 2 734 + 733 Gaps:41 98.96 768 52.76 0.0 Cullin-3-A OS Xenopus laevis GN cul3a PE 1 SV 1
blastp_uniprot_sprot sp|Q6GPF3|CUL3B_XENLA 2 734 + 733 Gaps:41 98.96 768 52.63 0.0 Cullin-3-B OS Xenopus laevis GN cul3b PE 1 SV 1
blastp_uniprot_sprot sp|A4IHP4|CUL3_XENTR 2 734 + 733 Gaps:41 98.96 768 52.63 0.0 Cullin-3 OS Xenopus tropicalis GN cul3 PE 2 SV 1
blastp_uniprot_sprot sp|Q17391|CUL3_CAEEL 2 734 + 733 Gaps:49 99.10 777 42.21 0.0 Cullin-3 OS Caenorhabditis elegans GN cul-3 PE 1 SV 2

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 405 552 148 SM00182 "UniPathway:UPA00143" Cullin IPR016158
PANTHER 4 734 731 PTHR11932 none none none
Gene3D 26 147 122 G3DSA:1.20.1310.10 none none none
Gene3D 492 557 66 G3DSA:4.10.1030.10 none none none
PANTHER 4 734 731 PTHR11932:SF59 none none none
Gene3D 269 378 110 G3DSA:1.20.1310.10 none none none
ProSiteProfiles 375 603 229 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
Coils 225 246 22 Coil none none none
SUPERFAMILY 369 642 274 SSF75632 "UniPathway:UPA00143" none IPR016158
Gene3D 151 266 116 G3DSA:1.20.1310.10 none none none
SMART 661 728 68 SM00884 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Pfam 661 727 67 PF10557 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Gene3D 379 483 105 G3DSA:1.20.1310.10 none none none
SUPERFAMILY 646 734 89 SSF46785 none none none
Pfam 29 633 605 PF00888 none Cullin family IPR001373
SUPERFAMILY 22 373 352 SSF74788 none none IPR016159
Gene3D 563 631 69 G3DSA:1.10.10.10 none none IPR011991
Gene3D 632 734 103 G3DSA:1.10.10.10 none none IPR011991

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting