Protein : Qrob_P0346340.2 Q. robur
Protein Identifier  ? Qrob_P0346340.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K03029 - 26S proteasome regulatory subunit N10 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 317  
Kegg Orthology  K03029
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0008540 proteasome regulatory particle, base subcomplex The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100791370 1 316 + 316 Gaps:12 78.89 398 78.98 6e-160 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|gmx:100780583 1 316 + 316 Gaps:5 79.26 405 82.55 3e-159 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_kegg lcl|pvu:PHAVU_003G264300g 1 316 + 316 Gaps:8 79.10 402 82.39 6e-158 hypothetical protein
blastp_kegg lcl|gmx:100814594 1 316 + 316 Gaps:5 79.26 405 81.93 6e-155 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|pxb:103953471 1 315 + 315 Gaps:10 79.16 403 81.19 1e-154 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_kegg lcl|tcc:TCM_000185 1 314 + 314 Gaps:6 78.43 408 82.81 1e-153 26S proteasome non-ATPase regulatory subunit 4 isoform 1
blastp_kegg lcl|cam:101506262 1 316 + 316 Gaps:12 79.31 406 81.37 2e-152 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|pper:PRUPE_ppa005827mg 1 315 + 315 Gaps:6 72.62 442 80.69 9e-152 hypothetical protein
blastp_kegg lcl|pxb:103967795 1 315 + 315 Gaps:9 79.10 402 82.39 4e-151 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_kegg lcl|gmx:100803975 1 316 + 316 Gaps:5 79.26 405 79.75 1e-150 26S proteasome non-ATPase regulatory subunit 4-like
blastp_pdb 2x5n_A 6 103 + 98 Gaps:7 52.60 192 40.59 5e-17 mol:protein length:192 26S PROTEASOME REGULATORY SUBUNIT RPN10
blastp_uniprot_sprot sp|P55034|PSMD4_ARATH 1 316 + 316 Gaps:27 77.98 386 60.47 2e-94 26S proteasome non-ATPase regulatory subunit 4 homolog OS Arabidopsis thaliana GN RPN10 PE 1 SV 1
blastp_uniprot_sprot sp|O35226|PSMD4_MOUSE 1 306 + 306 Gaps:76 76.06 376 37.41 3e-37 26S proteasome non-ATPase regulatory subunit 4 OS Mus musculus GN Psmd4 PE 1 SV 1
blastp_uniprot_sprot sp|P55035|PSMD4_DROME 1 295 + 295 Gaps:50 75.00 396 36.70 3e-37 26S proteasome non-ATPase regulatory subunit 4 OS Drosophila melanogaster GN Rpn10 PE 1 SV 2
blastp_uniprot_sprot sp|P55036|PSMD4_HUMAN 1 299 + 299 Gaps:71 74.27 377 39.64 2e-36 26S proteasome non-ATPase regulatory subunit 4 OS Homo sapiens GN PSMD4 PE 1 SV 1
blastp_uniprot_sprot sp|Q58DA0|PSMD4_BOVIN 1 299 + 299 Gaps:71 73.30 382 39.29 3e-36 26S proteasome non-ATPase regulatory subunit 4 OS Bos taurus GN PSMD4 PE 2 SV 1
blastp_uniprot_sprot sp|O94444|RPN10_SCHPO 6 171 + 166 Gaps:22 63.37 243 48.05 3e-35 26S proteasome regulatory subunit rpn10 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rpn10 PE 1 SV 1
blastp_uniprot_sprot sp|A2A3N6|PIPSL_HUMAN 1 299 + 299 Gaps:67 32.48 862 40.36 1e-32 Putative PIP5K1A and PSMD4-like protein OS Homo sapiens GN PIPSL PE 5 SV 1
blastp_uniprot_sprot sp|Q553E0|PSMD4_DICDI 1 284 + 284 Gaps:54 69.34 349 39.67 7e-29 26S proteasome non-ATPase regulatory subunit 4 OS Dictyostelium discoideum GN psmD4 PE 2 SV 1
blastp_uniprot_sprot sp|O17453|PSMD4_SCHMA 3 249 + 247 Gaps:45 51.90 420 40.37 2e-28 26S proteasome non-ATPase regulatory subunit 4 OS Schistosoma mansoni PE 2 SV 2
blastp_uniprot_sprot sp|P38886|RPN10_YEAST 1 146 + 146 Gaps:8 56.72 268 43.42 6e-27 26S proteasome regulatory subunit RPN10 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RPN10 PE 1 SV 3
rpsblast_cdd gnl|CDD|34749 2 171 + 170 Gaps:22 65.02 243 45.57 2e-28 COG5148 RPN10 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|29225 2 99 + 98 Gaps:6 54.55 187 53.92 1e-27 cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association..
rpsblast_kog gnl|CDD|38095 2 180 + 179 Gaps:17 67.18 259 52.87 4e-40 KOG2884 KOG2884 KOG2884 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 316 316 PTHR10223 none none IPR027040
SMART 203 222 20 SM00726 none Ubiquitin-interacting motif. IPR003903
SMART 133 152 20 SM00726 none Ubiquitin-interacting motif. IPR003903
SMART 235 254 20 SM00726 none Ubiquitin-interacting motif. IPR003903
ProSiteProfiles 203 222 20 PS50330 none Ubiquitin-interacting motif (UIM) domain profile. IPR003903
Pfam 135 148 14 PF02809 none Ubiquitin interaction motif IPR003903
Pfam 236 250 15 PF02809 none Ubiquitin interaction motif IPR003903
Pfam 202 218 17 PF02809 none Ubiquitin interaction motif IPR003903
SUPERFAMILY 2 87 86 SSF53300 none none IPR002035
ProSiteProfiles 133 152 20 PS50330 none Ubiquitin-interacting motif (UIM) domain profile. IPR003903
Coils 143 172 30 Coil none none none

0 Localization

0 Qtllist

0 Targeting