Protein : Qrob_P0365250.2 Q. robur
Protein Identifier  ? Qrob_P0365250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG2166//KOG2167//KOG2284//KOG2285 - Cullins [Cell cycle control cell division chromosome partitioning]. // Cullins [Cell cycle control cell division chromosome partitioning]. // E3 ubiquitin ligase Cullin 2 component [Posttranslational modification protein turnover chaperones]. // E3 ubiquitin ligase Cullin 1 component [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 474  
Kegg Orthology  K03869
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103487010 2 467 + 466 Gaps:6 64.12 733 72.98 0.0 cullin-3A-like
blastp_kegg lcl|csv:101204239 2 467 + 466 Gaps:6 64.12 733 72.98 0.0 cullin-3A-like
blastp_kegg lcl|cit:102630361 2 467 + 466 Gaps:6 64.12 733 71.91 0.0 cullin-3B-like
blastp_kegg lcl|cic:CICLE_v10011157mg 2 467 + 466 Gaps:6 64.12 733 71.70 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001982mg 2 467 + 466 Gaps:6 64.12 733 71.70 0.0 hypothetical protein
blastp_kegg lcl|sly:101254652 2 467 + 466 Gaps:6 64.12 733 70.85 0.0 cullin-3A-like
blastp_kegg lcl|mdm:103404435 2 467 + 466 Gaps:6 64.12 733 71.06 0.0 cullin-3A-like
blastp_kegg lcl|pxb:103933074 2 467 + 466 Gaps:6 64.12 733 71.06 0.0 cullin-3A-like
blastp_kegg lcl|vvi:100254227 2 467 + 466 Gaps:6 64.12 733 71.49 0.0 cullin-3B-like
blastp_kegg lcl|sot:102586525 2 467 + 466 Gaps:6 64.12 733 70.85 0.0 cullin-3A-like
blastp_pdb 4ap2_B 3 373 + 371 Gaps:14 92.44 410 43.01 4e-93 mol:protein length:410 CULLIN-3
blastp_pdb 4apf_B 17 373 + 357 Gaps:14 94.07 388 43.84 5e-93 mol:protein length:388 CULLIN 3
blastp_pdb 4a0k_A 11 469 + 459 Gaps:18 61.86 742 35.29 6e-73 mol:protein length:742 CULLIN-4A
blastp_pdb 2hye_C 11 469 + 459 Gaps:18 60.47 759 35.29 7e-73 mol:protein length:759 Cullin-4A
blastp_pdb 4a0c_E 11 470 + 460 Gaps:18 62.08 741 33.70 4e-66 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 11 470 + 460 Gaps:18 62.08 741 33.70 4e-66 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0l_H 11 470 + 460 Gaps:18 63.36 726 33.70 5e-66 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 11 470 + 460 Gaps:18 63.36 726 33.70 5e-66 mol:protein length:726 CULLIN-4B
blastp_pdb 1ldj_A 26 466 + 441 Gaps:69 65.26 760 30.04 2e-54 mol:protein length:760 Cullin homolog 1
blastp_pdb 1u6g_A 26 466 + 441 Gaps:69 63.92 776 30.04 2e-54 mol:protein length:776 Cullin homolog 1
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 2 467 + 466 Gaps:6 64.21 732 64.89 0.0 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9L0|CUL3B_ARATH 2 467 + 466 Gaps:6 64.21 732 63.19 0.0 Cullin-3B OS Arabidopsis thaliana GN CUL3B PE 1 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 13 471 + 459 Gaps:10 60.47 769 47.10 2e-139 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q13618|CUL3_HUMAN 3 467 + 465 Gaps:14 61.59 768 47.15 5e-138 Cullin-3 OS Homo sapiens GN CUL3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JLV5|CUL3_MOUSE 3 467 + 465 Gaps:14 61.59 768 46.93 1e-137 Cullin-3 OS Mus musculus GN Cul3 PE 1 SV 1
blastp_uniprot_sprot sp|B5DF89|CUL3_RAT 3 467 + 465 Gaps:14 61.59 768 46.93 1e-137 Cullin-3 OS Rattus norvegicus GN Cul3 PE 1 SV 2
blastp_uniprot_sprot sp|Q6GPF3|CUL3B_XENLA 3 467 + 465 Gaps:14 61.59 768 46.93 1e-137 Cullin-3-B OS Xenopus laevis GN cul3b PE 1 SV 1
blastp_uniprot_sprot sp|A4IHP4|CUL3_XENTR 3 467 + 465 Gaps:14 61.59 768 46.93 2e-137 Cullin-3 OS Xenopus tropicalis GN cul3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DE95|CUL3A_XENLA 3 467 + 465 Gaps:14 61.59 768 46.93 2e-137 Cullin-3-A OS Xenopus laevis GN cul3a PE 1 SV 1
blastp_uniprot_sprot sp|Q17391|CUL3_CAEEL 7 460 + 454 Gaps:19 60.62 777 37.58 4e-93 Cullin-3 OS Caenorhabditis elegans GN cul-3 PE 1 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 468 468 PTHR11932 none none none
SUPERFAMILY 361 468 108 SSF75632 "UniPathway:UPA00143" none IPR016158
Pfam 26 467 442 PF00888 none Cullin family IPR001373
Gene3D 23 144 122 G3DSA:1.20.1310.10 none none none
ProSiteProfiles 367 473 107 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
Gene3D 264 370 107 G3DSA:1.20.1310.10 none none none
Gene3D 147 259 113 G3DSA:1.20.1310.10 none none none
PANTHER 1 468 468 PTHR11932:SF59 none none none
Gene3D 371 468 98 G3DSA:1.20.1310.10 none none none
SMART 397 473 77 SM00182 "UniPathway:UPA00143" Cullin IPR016158
SUPERFAMILY 19 364 346 SSF74788 none none IPR016159

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting