Protein : Qrob_P0248440.2 Q. robur
Protein Identifier  ? Qrob_P0248440.2 Organism . Name  Quercus robur
Score  88.1 Score Type  egn
Protein Description  (M=3) K14016 - ubiquitin fusion degradation protein 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 327  
Kegg Orthology  K14016
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008670mg 11 326 + 316 Gaps:7 100.00 323 78.33 9e-180 hypothetical protein
blastp_kegg lcl|pmum:103322230 11 326 + 316 Gaps:7 100.00 323 78.64 3e-179 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|mdm:103420698 11 326 + 316 Gaps:8 100.00 322 75.78 5e-175 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|pxb:103964680 11 326 + 316 Gaps:8 100.00 322 76.40 9e-175 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|pxb:103954283 11 326 + 316 Gaps:9 85.83 374 76.32 3e-174 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|mdm:103447523 11 326 + 316 Gaps:8 100.00 322 76.09 2e-173 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|fve:101292678 11 326 + 316 Gaps:15 100.00 323 74.61 4e-173 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|rcu:RCOM_0300270 19 325 + 307 none 97.46 315 76.87 9e-171 ubiquitin fusion degradaton protein putative
blastp_kegg lcl|gmx:100803896 13 326 + 314 Gaps:1 99.06 318 73.02 1e-166 ubiquitin fusion degradation protein 1 homolog
blastp_kegg lcl|pop:POPTR_0001s24900g 14 326 + 313 Gaps:5 99.04 311 74.35 4e-163 POPTRDRAFT_843512 hypothetical protein
blastp_pdb 2yuj_A 12 189 + 178 Gaps:8 93.68 190 56.74 7e-70 mol:protein length:190 Ubiquitin fusion degradation 1-like
blastp_pdb 1zc1_A 20 199 + 180 Gaps:7 89.90 208 49.73 3e-59 mol:protein length:208 Ubiquitin fusion degradation protein 1
blastp_uniprot_sprot sp|Q9ES53|UFD1_RAT 17 251 + 235 Gaps:11 75.57 307 53.88 7e-80 Ubiquitin fusion degradation protein 1 homolog OS Rattus norvegicus GN Ufd1l PE 1 SV 1
blastp_uniprot_sprot sp|P70362|UFD1_MOUSE 17 251 + 235 Gaps:11 75.57 307 53.88 8e-80 Ubiquitin fusion degradation protein 1 homolog OS Mus musculus GN Ufd1l PE 1 SV 2
blastp_uniprot_sprot sp|Q92890|UFD1_HUMAN 17 251 + 235 Gaps:11 75.57 307 53.45 1e-78 Ubiquitin fusion degradation protein 1 homolog OS Homo sapiens GN UFD1L PE 1 SV 3
blastp_uniprot_sprot sp|Q55BK0|UFD1_DICDI 9 241 + 233 Gaps:28 79.09 330 45.59 2e-75 Ubiquitin fusion degradation protein 1 homolog OS Dictyostelium discoideum GN ufd1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9VTF9|UFD1_DROME 21 254 + 234 Gaps:17 76.27 316 46.89 1e-69 Ubiquitin fusion degradation protein 1 homolog OS Drosophila melanogaster GN Ufd1-like PE 2 SV 1
blastp_uniprot_sprot sp|O42915|UFD1_SCHPO 6 197 + 192 Gaps:12 56.14 342 48.44 2e-59 Ubiquitin fusion degradation protein 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ufd1 PE 2 SV 4
blastp_uniprot_sprot sp|P53044|UFD1_YEAST 20 304 + 285 Gaps:50 84.49 361 39.67 5e-59 Ubiquitin fusion degradation protein 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UFD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q19584|UFD1_CAEEL 17 261 + 245 Gaps:21 77.19 342 37.12 1e-49 Ubiquitin fusion degradation protein 1 homolog OS Caenorhabditis elegans GN ufd-1 PE 3 SV 1
rpsblast_cdd gnl|CDD|190546 20 192 + 173 Gaps:3 100.00 176 67.05 2e-89 pfam03152 UFD1 Ubiquitin fusion degradation protein UFD1. Post-translational ubiquitin-protein conjugates are recognised for degradation by the ubiquitin fusion degradation (UFD) pathway. Several proteins involved in this pathway have been identified. This family includes UFD1 a 40kD protein that is essential for vegetative cell viability. The human UFD1 gene is expressed at high levels during embryogenesis especially in the eyes and in the inner ear primordia and is thought to be important in the determination of ectoderm-derived structures including neural crest cells. In addition this gene is deleted in the CATCH-22 (cardiac defects abnormal facies thymic hypoplasia cleft palate and hypocalcaemia with deletions on chromosome 22) syndrome. This clinical syndrome is associated with a variety of developmental defects all characterized by microdeletions on 22q11.2. Two such developmental defects are the DiGeorge syndrome OMIM:188400 and the velo-cardio- facial syndrome OMIM:145410. Several of the abnormalities associated with these conditions are thought to be due to defective neural crest cell differentiation.
rpsblast_cdd gnl|CDD|34741 12 222 + 211 Gaps:10 64.35 331 40.85 4e-54 COG5140 UFD1 Ubiquitin fusion-degradation protein [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|178635 41 192 + 152 Gaps:16 29.63 567 36.90 2e-27 PLN03086 PLN03086 PRLI-interacting factor K Provisional.
rpsblast_kog gnl|CDD|37027 19 326 + 308 Gaps:28 95.45 308 52.04 3e-95 KOG1816 KOG1816 KOG1816 Ubiquitin fusion-degradation protein [Posttranslational modification protein turnover chaperones].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 21 192 172 PF03152 none Ubiquitin fusion degradation protein UFD1 IPR004854
PANTHER 270 326 57 PTHR12555 none none IPR004854
PANTHER 19 244 226 PTHR12555 none none IPR004854

0 Localization

0 Qtllist

0 Targeting