Protein : Qrob_P0126480.2 Q. robur
Protein Identifier  ? Qrob_P0126480.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=2) KOG1863//KOG1864//KOG1865//KOG1866//KOG1867//KOG1868//KOG1870//KOG1871//KOG1873//KOG4598 - Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 769  
Kegg Orthology  K11855
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103325824 1 763 + 763 Gaps:31 77.37 1003 65.08 0.0 ubiquitin carboxyl-terminal hydrolase 15
blastp_kegg lcl|pxb:103945986 1 763 + 763 Gaps:32 76.87 1016 63.38 0.0 ubiquitin carboxyl-terminal hydrolase 15-like
blastp_kegg lcl|fve:101309167 1 763 + 763 Gaps:33 76.79 1008 60.85 0.0 ubiquitin carboxyl-terminal hydrolase 15-like
blastp_kegg lcl|pper:PRUPE_ppa000901mg 1 763 + 763 Gaps:62 76.50 966 66.44 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_032321 1 763 + 763 Gaps:30 77.30 1000 62.61 0.0 Ubiquitin-specific protease 15 putative isoform 1
blastp_kegg lcl|mdm:103419884 1 763 + 763 Gaps:38 77.11 1005 63.35 0.0 ubiquitin carboxyl-terminal hydrolase 15-like
blastp_kegg lcl|mdm:103445721 1 763 + 763 Gaps:58 78.00 1032 60.37 0.0 ubiquitin carboxyl-terminal hydrolase 15
blastp_kegg lcl|pxb:103957330 1 763 + 763 Gaps:57 77.91 1032 60.57 0.0 ubiquitin carboxyl-terminal hydrolase 15-like
blastp_kegg lcl|cit:102628912 1 763 + 763 Gaps:73 77.24 1015 61.86 0.0 ubiquitin carboxyl-terminal hydrolase 15-like
blastp_kegg lcl|cic:CICLE_v10018666mg 1 763 + 763 Gaps:77 77.17 1016 62.12 0.0 hypothetical protein
blastp_pdb 3mhs_A 531 760 + 230 Gaps:20 50.42 476 33.33 3e-26 mol:protein length:476 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3mhh_A 531 760 + 230 Gaps:20 50.42 476 33.33 3e-26 mol:protein length:476 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3m99_A 531 760 + 230 Gaps:20 50.96 471 33.33 4e-26 mol:protein length:471 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3n3k_A 576 760 + 185 Gaps:8 47.22 396 34.22 1e-20 mol:protein length:396 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 2gfo_A 576 760 + 185 Gaps:8 47.22 396 34.22 1e-20 mol:protein length:396 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 3i3t_G 539 760 + 222 Gaps:52 72.68 355 30.23 3e-20 mol:protein length:355 Ubiquitin carboxyl-terminal hydrolase 21
blastp_pdb 3i3t_E 539 760 + 222 Gaps:52 72.68 355 30.23 3e-20 mol:protein length:355 Ubiquitin carboxyl-terminal hydrolase 21
blastp_pdb 3i3t_C 539 760 + 222 Gaps:52 72.68 355 30.23 3e-20 mol:protein length:355 Ubiquitin carboxyl-terminal hydrolase 21
blastp_pdb 3i3t_A 539 760 + 222 Gaps:52 72.68 355 30.23 3e-20 mol:protein length:355 Ubiquitin carboxyl-terminal hydrolase 21
blastp_pdb 3mtn_C 539 760 + 222 Gaps:52 69.17 373 30.23 3e-20 mol:protein length:373 Ubiquitin carboxyl-terminal hydrolase 21
blastp_uniprot_sprot sp|Q9FPS9|UBP15_ARATH 1 763 + 763 Gaps:173 80.52 924 57.12 0.0 Ubiquitin carboxyl-terminal hydrolase 15 OS Arabidopsis thaliana GN UBP15 PE 2 SV 2
blastp_uniprot_sprot sp|Q67XW5|UBP18_ARATH 439 762 + 324 Gaps:14 53.57 631 50.00 7e-107 Ubiquitin carboxyl-terminal hydrolase 18 OS Arabidopsis thaliana GN UBP18 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SJA1|UBP19_ARATH 76 762 + 687 Gaps:14 61.90 672 47.36 2e-103 Ubiquitin carboxyl-terminal hydrolase 19 OS Arabidopsis thaliana GN UBP19 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FKP5|UBP17_ARATH 21 764 + 744 Gaps:17 57.46 731 47.14 1e-88 Ubiquitin carboxyl-terminal hydrolase 17 OS Arabidopsis thaliana GN UBP17 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SB51|UBP16_ARATH 20 764 + 745 Gaps:24 53.17 1008 38.25 5e-85 Ubiquitin carboxyl-terminal hydrolase 16 OS Arabidopsis thaliana GN UBP16 PE 1 SV 1
blastp_uniprot_sprot sp|D3ZU96|UBP42_RAT 446 763 + 318 Gaps:22 24.30 1325 38.20 4e-57 Ubiquitin carboxyl-terminal hydrolase 42 OS Rattus norvegicus GN Usp42 PE 3 SV 1
blastp_uniprot_sprot sp|E1B9W9|UBP42_BOVIN 446 763 + 318 Gaps:22 24.16 1333 38.20 6e-57 Ubiquitin carboxyl-terminal hydrolase 42 OS Bos taurus GN USP42 PE 3 SV 1
blastp_uniprot_sprot sp|Q9H9J4|UBP42_HUMAN 446 763 + 318 Gaps:22 24.32 1324 38.20 7e-57 Ubiquitin carboxyl-terminal hydrolase 42 OS Homo sapiens GN USP42 PE 1 SV 3
blastp_uniprot_sprot sp|B2RQC2|UBP42_MOUSE 446 763 + 318 Gaps:22 24.32 1324 38.20 8e-57 Ubiquitin carboxyl-terminal hydrolase 42 OS Mus musculus GN Usp42 PE 2 SV 1
blastp_uniprot_sprot sp|Q6QN14|U17L6_HUMAN 500 768 + 269 Gaps:11 64.82 398 37.60 7e-55 Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 OS Homo sapiens GN USP17L6P PE 1 SV 2

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 514 760 247 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394
PANTHER 49 167 119 PTHR24006 none none none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 500 768 269 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 477 499 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 584 653 70 G3DSA:2.20.210.10 none none none
SUPERFAMILY 467 765 299 SSF54001 none none none
Phobius 31 476 446 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 468 763 296 PS50235 none Ubiquitin specific protease (USP) domain profile. IPR028889
ProSiteProfiles 76 113 38 PS50865 none Zinc finger MYND-type profile. IPR002893
PANTHER 49 167 119 PTHR24006:SF358 none none none
PANTHER 464 764 301 PTHR24006:SF358 none none none
Pfam 76 113 38 PF01753 none MYND finger IPR002893
SUPERFAMILY 73 117 45 SSF144232 none none none
PANTHER 464 764 301 PTHR24006 none none none

2 Localization

Analysis Start End Length
TMHMM 469 491 22
TMHMM 10 27 17

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.986 0.004 NON-PLANT 23