16 Parents
| Identifier | Name | Description |
|---|---|---|
| GO:0005634 | nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| GO:0005681 | spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
| GO:0005622 | intracellular | The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0030529 | ribonucleoprotein complex | A macromolecular complex containing both protein and RNA molecules. |
| GO:0043231 | intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| GO:0044424 | intracellular part | Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0005623 | cell | The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. |
| GO:0032991 | macromolecular complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together. |
| GO:0044464 | cell part | Any constituent part of a cell, the basic structural and functional unit of all organisms. |
| GO:0005575 | cellular_component | The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together. |
| GO:0044428 | nuclear part | Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. |
| GO:0044422 | organelle part | Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane. |
| GO:0044446 | intracellular organelle part | A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane. |
| GO:0043226 | organelle | Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. |
| GO:0043227 | membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| GO:0043229 | intracellular organelle | Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
16 Protein
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0001910.2 | Quercus robur | 100.0 | egn | (M=1) K12859 - U5 snRNP protein, DIM1 family | validated | ||
| Qrob_P0143650.2 | Quercus robur | 9.1 | egn | (M=4) K12874 - intron-binding protein aquarius | validated | ||
| Qrob_P0218910.2 | Quercus robur | 1.0 | egn | (M=4) K12874 - intron-binding protein aquarius | validated | ||
| Qrob_P0341370.2 | Quercus robur | 0.0 | egn | (M=1) KOG1802//KOG1806 - RNA helicase nonsense mRNA reducing factor (pNORF1) [RNA processing and modification]. // DEAD box containing helicases [Replication recombination and repair]. | validated | ||
| Qrob_P0341490.2 | Quercus robur | 0.0 | egn | (M=1) KOG1802//KOG1803//KOG1806//KOG1807 - RNA helicase nonsense mRNA reducing factor (pNORF1) [RNA processing and modification]. // DNA helicase [Replication recombination and repair]. // DEAD box containing helicases [Replication recombination and repair]. // Helicases [Replication recombination and repair]. | validated | ||
| Qrob_P0371160.2 | Quercus robur | 100.0 | egn | (M=1) PTHR12794 - GEMIN2 | validated | ||
| Qrob_P0379960.2 | Quercus robur | 0.0 | egn | (M=3) K06063 - SNW domain-containing protein 1 | validated | ||
| Qrob_P0380030.2 | Quercus robur | 0.0 | egn | (M=3) K06063 - SNW domain-containing protein 1 | validated | ||
| Qrob_P0398830.2 | Quercus robur | 0.0 | egn | (M=1) PTHR12052:SF4 - THIOREDOXIN-LIKE PROTEN 4A, 4B | validated | ||
| Qrob_P0474090.2 | Quercus robur | 0.0 | egn | (M=3) K12817 - pre-mRNA-splicing factor 18 | validated | ||
| Qrob_P0511570.2 | Quercus robur | 23.3 | egn | (M=4) K12874 - intron-binding protein aquarius | validated | ||
| Qrob_P0562770.2 | Quercus robur | 100.0 | egn | (M=1) K12856 - pre-mRNA-processing factor 8 | validated | ||
| Qrob_P0664340.2 | Quercus robur | 100.0 | egn | (M=3) K12817 - pre-mRNA-splicing factor 18 | validated | ||
| Qrob_P0664350.2 | Quercus robur | 100.0 | egn | (M=3) K12817 - pre-mRNA-splicing factor 18 | validated | ||
| Qrob_P0706880.2 | Quercus robur | 100.0 | egn | (M=3) K06063 - SNW domain-containing protein 1 | validated | ||
| Qrob_P0743120.2 | Quercus robur | 100.0 | egn | (M=1) PTHR10548//PTHR10548:SF83 - SPLICING FACTOR, ARGININE/SERINE-RICH // SUBFAMILY NOT NAMED | validated |
41 Relations
| Relationship |
Parent Term . Identifier |
Child Term . Identifier |
|---|---|---|
| is_a | GO:0005681 | GO:0000243 |
| is_a | GO:0030529 | GO:0005681 |
| is_a | GO:0044428 | GO:0005681 |
| part of | GO:0044424 | GO:0005681 |
| is_a | GO:0005575 | GO:0005681 |
| part of | GO:0005575 | GO:0005681 |
| part of | GO:0005622 | GO:0005681 |
| part of | GO:0005623 | GO:0005681 |
| is_a | GO:0044446 | GO:0005681 |
| is_a | GO:0044464 | GO:0005681 |
| part of | GO:0005634 | GO:0005681 |
| is_a | GO:0044424 | GO:0005681 |
| part of | GO:0043229 | GO:0005681 |
| is_a | GO:0044422 | GO:0005681 |
| part of | GO:0043226 | GO:0005681 |
| part of | GO:0043227 | GO:0005681 |
| is_a | GO:0032991 | GO:0005681 |
| part of | GO:0043231 | GO:0005681 |
| part of | GO:0044464 | GO:0005681 |
| is_a | GO:0005681 | GO:0005684 |
| is_a | GO:0005681 | GO:0005689 |
| is_a | GO:0005681 | GO:0044530 |
| is_a | GO:0005681 | GO:0071004 |
| is_a | GO:0005681 | GO:0071005 |
| is_a | GO:0005681 | GO:0071006 |
| is_a | GO:0005681 | GO:0071007 |
| is_a | GO:0005681 | GO:0071008 |
| is_a | GO:0005681 | GO:0071010 |
| is_a | GO:0005681 | GO:0071011 |
| is_a | GO:0005681 | GO:0071012 |
