20 Parents
| Identifier | Name | Description |
|---|---|---|
| GO:0005634 | nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| GO:0005622 | intracellular | The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0005730 | nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| GO:0043231 | intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| GO:0044424 | intracellular part | Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0005623 | cell | The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. |
| GO:0044464 | cell part | Any constituent part of a cell, the basic structural and functional unit of all organisms. |
| GO:0005575 | cellular_component | The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together. |
| GO:0044428 | nuclear part | Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. |
| GO:0044422 | organelle part | Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane. |
| GO:0044446 | intracellular organelle part | A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane. |
| GO:0043226 | organelle | Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. |
| GO:0043227 | membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| GO:0043229 | intracellular organelle | Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
| GO:0043233 | organelle lumen | The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen. |
| GO:0031981 | nuclear lumen | The volume enclosed by the nuclear inner membrane. |
| GO:0070013 | intracellular organelle lumen | An organelle lumen that is part of an intracellular organelle. |
| GO:0031974 | membrane-enclosed lumen | The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen. |
| GO:0043228 | non-membrane-bounded organelle | Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes. |
| GO:0043232 | intracellular non-membrane-bounded organelle | Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes. |
11 Protein
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0133720.2 | Quercus robur | 100.0 | egn | (M=1) K11129 - H/ACA ribonucleoprotein complex subunit 2 | validated | ||
| Qrob_P0290660.2 | Quercus robur | 6.3 | egn | (M=1) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0296//KOG0310//KOG0319//KOG2495//KOG4378 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. // NADH-dehydrogenase (ubiquinone) [Energy production and conversion]. // Nuclear protein COP1 [Signal transduction mechanisms]. | validated | ||
| Qrob_P0290760.2 | Quercus robur | 0.0 | egn | (M=2) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0276//KOG0284//KOG0305//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Vesicle coat complex COPI beta' subunit [Intracellular trafficking secretion and vesicular transport]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Anaphase promoting complex Cdc20 Cdh1 and Ama1 subunits [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0290810.2 | Quercus robur | 0.0 | egn | (M=6) K14549 - U3 small nucleolar RNA-associated protein 15 | validated | ||
| Qrob_P0290830.2 | Quercus robur | 0.0 | egn | (M=1) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0282//KOG0284//KOG0285//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // mRNA splicing factor [Function unknown]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Pleiotropic regulator 1 [RNA processing and modification]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0294600.2 | Quercus robur | 90.0 | egn | (M=1) K12845 - U4/U6 small nuclear ribonucleoprotein SNU13 | validated | ||
| Qrob_P0297860.2 | Quercus robur | 100.0 | egn | (M=2) KOG0263//KOG0266//KOG0271//KOG0272//KOG0274//KOG0276//KOG0284//KOG0305//KOG0310//KOG0319 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Vesicle coat complex COPI beta' subunit [Intracellular trafficking secretion and vesicular transport]. // Polyadenylation factor I complex subunit PFS2 [RNA processing and modification]. // Anaphase promoting complex Cdc20 Cdh1 and Ama1 subunits [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones]. // Conserved WD40 repeat-containing protein [Function unknown]. // WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]. | validated | ||
| Qrob_P0335750.2 | Quercus robur | 100.0 | egn | (M=1) K14537 - nuclear GTP-binding protein | validated | ||
| Qrob_P0347410.2 | Quercus robur | 99.0 | egn | (M=3) K06943 - nucleolar GTP-binding protein | validated | ||
| Qrob_P0689980.2 | Quercus robur | 54.4 | egn | (M=3) K06943 - nucleolar GTP-binding protein | validated | ||
| Qrob_P0766940.2 | Quercus robur | 100.0 | egn | (M=1) K14843 - pescadillo | validated |
50 Relations
| Relationship |
Parent Term . Identifier |
Child Term . Identifier |
|---|---|---|
| part of | GO:0005730 | GO:0000120 |
| part of | GO:0005730 | GO:0000500 |
| part of | GO:0005730 | GO:0001650 |
| part of | GO:0005730 | GO:0001651 |
| part of | GO:0005730 | GO:0001652 |
| part of | GO:0005730 | GO:0005655 |
| part of | GO:0005730 | GO:0005668 |
| part of | GO:0031981 | GO:0005730 |
| is_a | GO:0043232 | GO:0005730 |
| is_a | GO:0044428 | GO:0005730 |
| part of | GO:0031974 | GO:0005730 |
| part of | GO:0005575 | GO:0005730 |
| part of | GO:0044428 | GO:0005730 |
| part of | GO:0044464 | GO:0005730 |
| is_a | GO:0044424 | GO:0005730 |
| part of | GO:0044422 | GO:0005730 |
| part of | GO:0044446 | GO:0005730 |
| part of | GO:0043231 | GO:0005730 |
| part of | GO:0044424 | GO:0005730 |
| is_a | GO:0044446 | GO:0005730 |
| part of | GO:0043233 | GO:0005730 |
| part of | GO:0043227 | GO:0005730 |
| part of | GO:0043226 | GO:0005730 |
| is_a | GO:0005575 | GO:0005730 |
| is_a | GO:0044464 | GO:0005730 |
| part of | GO:0005634 | GO:0005730 |
| is_a | GO:0043226 | GO:0005730 |
| part of | GO:0005623 | GO:0005730 |
| part of | GO:0043229 | GO:0005730 |
| is_a | GO:0044422 | GO:0005730 |
