Protein : Qrob_P0744160.2 Q. robur
Protein Identifier  ? Qrob_P0744160.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=4) K17686 - Cu+-exporting ATPase [EC:3.6.3.54] Code Enzyme  EC:3.6.3.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 928  
Kegg Orthology  K17686
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005507 copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0019829 cation-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000897mg 1 923 + 923 Gaps:83 98.45 967 75.00 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1577390 2 925 + 924 Gaps:74 99.59 968 73.55 0.0 copper-transporting atpase p-type putative (EC:3.6.3.4)
blastp_kegg lcl|pmum:103326728 1 923 + 923 Gaps:92 98.43 958 74.66 0.0 probable copper-transporting ATPase HMA5
blastp_kegg lcl|pop:POPTR_0001s05650g 1 925 + 925 Gaps:77 98.97 974 73.65 0.0 POPTRDRAFT_547880 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10014148mg 4 925 + 922 Gaps:77 97.87 986 72.54 0.0 hypothetical protein
blastp_kegg lcl|pxb:103938269 1 923 + 923 Gaps:83 98.04 971 73.32 0.0 probable copper-transporting ATPase HMA5
blastp_kegg lcl|pxb:103946253 1 923 + 923 Gaps:83 98.04 971 73.32 0.0 probable copper-transporting ATPase HMA5
blastp_kegg lcl|cit:102620411 4 925 + 922 Gaps:77 97.87 986 72.44 0.0 probable copper-transporting ATPase HMA5-like
blastp_kegg lcl|fve:101302901 1 923 + 923 Gaps:83 98.04 971 73.11 0.0 putative copper-transporting ATPase HMA5-like
blastp_kegg lcl|sot:102583551 1 926 + 926 Gaps:74 99.90 965 68.98 0.0 probable copper-transporting ATPase HMA5-like
blastp_pdb 3j08_B 353 923 + 571 Gaps:72 92.56 645 43.89 5e-132 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j08_A 353 923 + 571 Gaps:72 92.56 645 43.89 5e-132 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j09_B 114 923 + 810 Gaps:72 91.01 723 43.62 1e-131 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j09_A 114 923 + 810 Gaps:72 91.01 723 43.62 1e-131 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3rfu_D 276 916 + 641 Gaps:96 88.45 736 39.32 3e-118 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_C 276 916 + 641 Gaps:96 88.45 736 39.32 3e-118 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_B 276 916 + 641 Gaps:96 88.45 736 39.32 3e-118 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_A 276 916 + 641 Gaps:96 88.45 736 39.32 3e-118 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3a1d_B 575 863 + 289 Gaps:13 96.17 287 51.09 2e-70 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_pdb 3a1d_A 575 863 + 289 Gaps:13 96.17 287 51.09 2e-70 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_uniprot_sprot sp|Q9SH30|HMA5_ARATH 32 921 + 890 Gaps:97 94.47 995 56.70 0.0 Probable copper-transporting ATPase HMA5 OS Arabidopsis thaliana GN HMA5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9S7J8|HMA7_ARATH 35 921 + 887 Gaps:97 93.51 1001 43.80 0.0 Copper-transporting ATPase RAN1 OS Arabidopsis thaliana GN RAN1 PE 1 SV 1
blastp_uniprot_sprot sp|Q64446|ATP7B_MOUSE 36 926 + 891 Gaps:286 90.15 1462 38.01 8e-171 Copper-transporting ATPase 2 OS Mus musculus GN Atp7b PE 1 SV 2
blastp_uniprot_sprot sp|Q64535|ATP7B_RAT 41 926 + 886 Gaps:177 74.43 1451 41.57 5e-166 Copper-transporting ATPase 2 OS Rattus norvegicus GN Atp7b PE 2 SV 1
blastp_uniprot_sprot sp|Q04656|ATP7A_HUMAN 10 923 + 914 Gaps:389 87.53 1500 40.21 1e-164 Copper-transporting ATPase 1 OS Homo sapiens GN ATP7A PE 1 SV 3
blastp_uniprot_sprot sp|P35670|ATP7B_HUMAN 19 921 + 903 Gaps:330 90.58 1465 41.60 4e-161 Copper-transporting ATPase 2 OS Homo sapiens GN ATP7B PE 1 SV 4
blastp_uniprot_sprot sp|P70705|ATP7A_RAT 5 923 + 919 Gaps:315 94.17 1492 37.65 8e-161 Copper-transporting ATPase 1 OS Rattus norvegicus GN Atp7a PE 1 SV 1
blastp_uniprot_sprot sp|Q64430|ATP7A_MOUSE 5 925 + 921 Gaps:319 94.70 1491 37.96 3e-160 Copper-transporting ATPase 1 OS Mus musculus GN Atp7a PE 1 SV 3
blastp_uniprot_sprot sp|Q8CN02|COPA_STAES 37 919 + 883 Gaps:120 99.37 794 43.35 3e-159 Copper-exporting P-type ATPase A OS Staphylococcus epidermidis (strain ATCC 12228) GN copA PE 3 SV 1
blastp_uniprot_sprot sp|Q5HL56|COPA_STAEQ 37 919 + 883 Gaps:120 99.37 794 43.35 3e-159 Copper-exporting P-type ATPase A OS Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN copA PE 3 SV 1

60 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 37 103 67 PS50846 none Heavy-metal-associated domain profile. IPR006121
PANTHER 333 923 591 PTHR24093:SF230 none none none
PANTHER 73 172 100 PTHR24093:SF230 none none none
PANTHER 73 172 100 PTHR24093 none none none
PANTHER 229 278 50 PTHR24093 none none none
TIGRFAM 539 884 346 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 531 549 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 333 923 591 PTHR24093 none none none
SUPERFAMILY 182 251 70 SSF55008 none none IPR006121
Pfam 595 820 226 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
Phobius 890 894 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 111 177 67 PS50846 none Heavy-metal-associated domain profile. IPR006121
Gene3D 613 733 121 G3DSA:3.40.1110.10 none none IPR023299
Gene3D 367 509 143 G3DSA:2.70.150.10 none none IPR008250
Phobius 310 332 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 510 530 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 403 439 37 SSF81665 none none none
SUPERFAMILY 486 593 108 SSF81665 none none none
SUPERFAMILY 855 870 16 SSF81665 none none none
Gene3D 570 612 43 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 734 875 142 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 185 270 86 G3DSA:3.30.70.100 none none none
Phobius 279 298 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 299 309 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 597 617 21 SSF56784 none none IPR023214
SUPERFAMILY 663 912 250 SSF56784 none none IPR023214
Gene3D 112 182 71 G3DSA:3.30.70.100 none none none
Phobius 866 889 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 455 516 62 SSF81653 none none none
ProSiteProfiles 186 252 67 PS50846 none Heavy-metal-associated domain profile. IPR006121

8 Localization

Analysis Start End Length
TMHMM 310 332 22
TMHMM 278 300 22
TMHMM 544 566 22
TMHMM 866 888 22
TMHMM 510 529 19
TMHMM 371 388 17
TMHMM 893 915 22
TMHMM 344 361 17

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting